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Q55702 (Y229_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized oxidoreductase slr0229

EC=1.1.-.-
Gene names
Ordered Locus Names:slr0229
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length290 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 3-hydroxyisobutyrate dehydrogenase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 290290Uncharacterized oxidoreductase slr0229
PRO_0000173070

Regions

Nucleotide binding7 – 2115NAD By similarity

Sites

Active site1751 By similarity
Binding site1001NAD By similarity
Binding site2431NAD By similarity

Sequences

Sequence LengthMass (Da)Tools
Q55702 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: BB167CD4FCF4A37A

FASTA29029,930
        10         20         30         40         50         60 
MNVSKIAVFG LGVMGSPMAQ NLVKNGYQTV GYNRTLERPS VQEAAKAGVK VVTSIAVAAA 

        70         80         90        100        110        120 
NADIILTCVG DEKDVQQLIL GSGGIAEYAK PQALIIDCST IGKTAAYELA TNLKLQGLRF 

       130        140        150        160        170        180 
LDAPVTGGDV GAINGTLTIM VGGDISDFEE ALPVLKSIGE KIVHCGPSGS GQAVKLCNQV 

       190        200        210        220        230        240 
LCGIHAIAAA EAIQLSEQLG IAPELVIDTC GSGAAGSWAL TNLAPKMSEA DFAPGFMVKH 

       250        260        270        280        290 
LLKDLRLVRE AAENGPLPGV TLAESLFTSV QLLGGEDQGS QAIIRAYREA 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27184 / PCC 6803 / N-1.
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10233.1.
PIRS76381.
RefSeqNP_442163.1. NC_000911.1.
YP_005652222.1. NC_017277.1.
YP_007452040.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55702.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55702. 2 interactions.
STRING1148.slr0229.

Proteomic databases

PaxDbQ55702.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10233; BAA10233; BAA10233.
GeneID12253441.
14617716.
952814.
KEGGsyn:slr0229.
syy:SYNGTS_2269.
syz:MYO_122940.
PATRIC23841944. VBISynSp132158_2514.

Phylogenomic databases

eggNOGCOG2084.
HOGENOMHOG000219608.
KOK00020.
OMAMMQALKA.
OrthoDBEOG6XDH0X.
PhylomeDBQ55702.
ProtClustDBCLSK893446.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR002204. 3-OH-isobutyrate_DH-rel_CS.
IPR008927. 6-PGluconate_DH_C-like.
IPR006115. 6PGDH_NADP-bd.
IPR013328. DH_multihelical.
IPR015815. HIBADH-type.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR22981. PTHR22981. 1 hit.
PfamPF03446. NAD_binding_2. 1 hit.
[Graphical view]
PIRSFPIRSF000103. HIBADH. 1 hit.
SUPFAMSSF48179. SSF48179. 1 hit.
PROSITEPS00895. 3_HYDROXYISOBUT_DH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY229_SYNY3
AccessionPrimary (citable) accession number: Q55702
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families