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Protein

Probable T4-type lysozyme 1

Gene

DDB_G0274831

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei13Proton donorBy similarity1
Active sitei22NucleophileBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAntimicrobial, Bacteriolytic enzyme, Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH24 Glycoside Hydrolase Family 24

Names & Taxonomyi

Protein namesi
Recommended name:
Probable T4-type lysozyme 1 (EC:3.2.1.17)
Alternative name(s):
Muramidase
Gene namesi
ORF Names:DDB_G0274831
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyostelidsDictyostelialesDictyosteliaceaeDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 2, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0274831

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003287191 – 170Probable T4-type lysozyme 1Add BLAST170

Proteomic databases

PaxDbiQ556F2
PRIDEiQ556F2

Structurei

3D structure databases

ProteinModelPortaliQ556F2
SMRiQ556F2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 24 family.Curated

Phylogenomic databases

eggNOGiENOG4111JK8 LUCA
InParanoidiQ556F2

Family and domain databases

InterProiView protein in InterPro
IPR002196 Glyco_hydro_24
IPR023346 Lysozyme-like_dom_sf
IPR001165 T4-type_lysozyme
PfamiView protein in Pfam
PF00959 Phage_lysozyme, 1 hit
PRINTSiPR00684 T4LYSOZYME
SUPFAMiSSF53955 SSF53955, 1 hit

Sequencei

Sequence statusi: Complete.

Q556F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSSIKDMLK YDEGEKLEMY KDTEGYYTIG IGHLITRIKE RNAAILSLEE
60 70 80 90 100
KIGHKVKMDS KNEPIITSSE SEALFEKDLS VATKSIESNP TLSTIYKNLD
110 120 130 140 150
NIRKMAIINM VFQMGVNNVL TFKMSLKLIE EKKWAEAAKE MKNSTWNHQT
160 170
PNRSNRVISV IETGTLNAYK
Length:170
Mass (Da):19,410
Last modified:May 24, 2005 - v1
Checksum:iC52B6A327951770A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000012 Genomic DNA Translation: EAL70308.1
RefSeqiXP_643993.1, XM_638901.1

Genome annotation databases

EnsemblProtistsiEAL70308; EAL70308; DDB_G0274831
GeneIDi8619419
KEGGiddi:DDB_G0274831

Similar proteinsi

Entry informationi

Entry nameiLYST1_DICDI
AccessioniPrimary (citable) accession number: Q556F2
Secondary accession number(s): Q86AA0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: May 24, 2005
Last modified: May 23, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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