Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q555Q9

- GLGB_DICDI

UniProt

Q555Q9 - GLGB_DICDI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan-branching enzyme

Gene

glgB

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei338 – 3381NucleophileBy similarity
Active sitei391 – 3911Proton donorBy similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. generation of precursor metabolites and energy Source: dictyBase
  2. glycogen biosynthetic process Source: UniProtKB
  3. glycogen metabolic process Source: dictyBase
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
Alternative name(s):
Glycogen-branching enzyme
Gene namesi
Name:glgB
ORF Names:DDB_G0274105
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
ProteomesiUP000002195: Chromosome 2, UP000002195: Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0274105. glgB.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6786781,4-alpha-glucan-branching enzymePRO_0000327602Add
BLAST

Proteomic databases

PRIDEiQ555Q9.

Interactioni

Subunit structurei

Monomer.By similarity

Protein-protein interaction databases

STRINGi44689.DDB_0214943.

Structurei

3D structure databases

ProteinModelPortaliQ555Q9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
InParanoidiQ555Q9.
KOiK00700.
OMAiGPRGTHD.
PhylomeDBiQ555Q9.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q555Q9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDYSKATDG TKVIHDDPWL EPYKEVIKRR HNQVKNTIQK LEESEGSLLK
60 70 80 90 100
FSQGYEYFGF NVTKDGVNYR EWLPSAHEVY LVGDFNQWNK TSHPLERDNY
110 120 130 140 150
GRWSIFIPNN SNGECAIPHG SKIKIYLKLA NGNFDYRIPA WIKRVEQTKE
160 170 180 190 200
NPVFDGVFWN PSKQYVFKNK SPMKPTELRI YEAHVGMSSE LPEISTYSKF
210 220 230 240 250
KDTVLPMVKE LGYNCIQLMA VMEHAYYASF GYQVTNFFAI SSRFGTPEEL
260 270 280 290 300
KEMIDKAHEM GLLVFLDVVH SHASKNVLDG LNQLDGTDHH YFHSGGRGNH
310 320 330 340 350
ELWDSRLFNY GNWEVMRFLL SNLRFYVDEY HFDGFRFDGV TSMIYTHHGL
360 370 380 390 400
SPACSYDDYF GGAVDEDALN YLTLANVMLH TLNPSIVTIA EEVTGLATLC
410 420 430 440 450
RPFSEGGGDF DYRLAMGIPD KWIELVKEKK DEDWNMGTIA HMLSNRRYKE
460 470 480 490 500
KNIAYAESHD QSLVGDKTLA FWLMDKEMYT NMSVTTEETP IIDRGMSLHK
510 520 530 540 550
MIRLITSSLG GDGYLNFMGN EFGHPEWVDF PREGNNNSLH HARRRWDLYR
560 570 580 590 600
NPLLRYKQLR DFDIAMNKAE QEFRWLSSDF AYISLKHEDD KIIVFERASL
610 620 630 640 650
IFIFNFHPSK SFSDYRIGSG VPGKFINVLD SDRKEFGGHV RIGKDNYHYT
660 670
EDKPWHDRKY SLLIYIPSRT CLVLKKVD
Length:678
Mass (Da):78,891
Last modified:May 24, 2005 - v1
Checksum:i878594DD748805D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000012 Genomic DNA. Translation: EAL69945.1.
RefSeqiXP_644004.1. XM_638912.1.

Genome annotation databases

EnsemblProtistsiDDB0214943; DDB0214943; DDB_G0274105.
GeneIDi8619432.
KEGGiddi:DDB_G0274105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000012 Genomic DNA. Translation: EAL69945.1 .
RefSeqi XP_644004.1. XM_638912.1.

3D structure databases

ProteinModelPortali Q555Q9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 44689.DDB_0214943.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Proteomic databases

PRIDEi Q555Q9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi DDB0214943 ; DDB0214943 ; DDB_G0274105 .
GeneIDi 8619432.
KEGGi ddi:DDB_G0274105.

Organism-specific databases

dictyBasei DDB_G0274105. glgB.

Phylogenomic databases

eggNOGi COG0296.
InParanoidi Q555Q9.
KOi K00700.
OMAi GPRGTHD.
PhylomeDBi Q555Q9.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Miscellaneous databases

PROi Q555Q9.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AX4.
  2. "The genome of the social amoeba Dictyostelium discoideum."
    Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
    , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
    Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AX4.

Entry informationi

Entry nameiGLGB_DICDI
AccessioniPrimary (citable) accession number: Q555Q9
Secondary accession number(s): Q8T189
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: May 24, 2005
Last modified: October 29, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3