Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q555Q9

- GLGB_DICDI

UniProt

Q555Q9 - GLGB_DICDI

Protein

1,4-alpha-glucan-branching enzyme

Gene

glgB

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (24 May 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei338 – 3381NucleophileBy similarity
    Active sitei391 – 3911Proton donorBy similarity

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. generation of precursor metabolites and energy Source: dictyBase
    2. glycogen biosynthetic process Source: UniProtKB
    3. glycogen metabolic process Source: dictyBase

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiCBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
    Alternative name(s):
    Glycogen-branching enzyme
    Gene namesi
    Name:glgB
    ORF Names:DDB_G0274105
    OrganismiDictyostelium discoideum (Slime mold)
    Taxonomic identifieri44689 [NCBI]
    Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
    ProteomesiUP000002195: Chromosome 2, UP000002195: Unassembled WGS sequence

    Organism-specific databases

    dictyBaseiDDB_G0274105. glgB.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6786781,4-alpha-glucan-branching enzymePRO_0000327602Add
    BLAST

    Proteomic databases

    PRIDEiQ555Q9.

    Interactioni

    Subunit structurei

    Monomer.By similarity

    Protein-protein interaction databases

    STRINGi44689.DDB_0214943.

    Structurei

    3D structure databases

    ProteinModelPortaliQ555Q9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0296.
    KOiK00700.
    OMAiGPRGTHD.
    PhylomeDBiQ555Q9.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q555Q9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTDYSKATDG TKVIHDDPWL EPYKEVIKRR HNQVKNTIQK LEESEGSLLK    50
    FSQGYEYFGF NVTKDGVNYR EWLPSAHEVY LVGDFNQWNK TSHPLERDNY 100
    GRWSIFIPNN SNGECAIPHG SKIKIYLKLA NGNFDYRIPA WIKRVEQTKE 150
    NPVFDGVFWN PSKQYVFKNK SPMKPTELRI YEAHVGMSSE LPEISTYSKF 200
    KDTVLPMVKE LGYNCIQLMA VMEHAYYASF GYQVTNFFAI SSRFGTPEEL 250
    KEMIDKAHEM GLLVFLDVVH SHASKNVLDG LNQLDGTDHH YFHSGGRGNH 300
    ELWDSRLFNY GNWEVMRFLL SNLRFYVDEY HFDGFRFDGV TSMIYTHHGL 350
    SPACSYDDYF GGAVDEDALN YLTLANVMLH TLNPSIVTIA EEVTGLATLC 400
    RPFSEGGGDF DYRLAMGIPD KWIELVKEKK DEDWNMGTIA HMLSNRRYKE 450
    KNIAYAESHD QSLVGDKTLA FWLMDKEMYT NMSVTTEETP IIDRGMSLHK 500
    MIRLITSSLG GDGYLNFMGN EFGHPEWVDF PREGNNNSLH HARRRWDLYR 550
    NPLLRYKQLR DFDIAMNKAE QEFRWLSSDF AYISLKHEDD KIIVFERASL 600
    IFIFNFHPSK SFSDYRIGSG VPGKFINVLD SDRKEFGGHV RIGKDNYHYT 650
    EDKPWHDRKY SLLIYIPSRT CLVLKKVD 678
    Length:678
    Mass (Da):78,891
    Last modified:May 24, 2005 - v1
    Checksum:i878594DD748805D7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000012 Genomic DNA. Translation: EAL69945.1.
    RefSeqiXP_644004.1. XM_638912.1.

    Genome annotation databases

    EnsemblProtistsiDDB0214943; DDB0214943; DDB_G0274105.
    GeneIDi8619432.
    KEGGiddi:DDB_G0274105.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000012 Genomic DNA. Translation: EAL69945.1 .
    RefSeqi XP_644004.1. XM_638912.1.

    3D structure databases

    ProteinModelPortali Q555Q9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 44689.DDB_0214943.

    Protein family/group databases

    CAZyi CBM48. Carbohydrate-Binding Module Family 48.
    GH13. Glycoside Hydrolase Family 13.

    Proteomic databases

    PRIDEi Q555Q9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi DDB0214943 ; DDB0214943 ; DDB_G0274105 .
    GeneIDi 8619432.
    KEGGi ddi:DDB_G0274105.

    Organism-specific databases

    dictyBasei DDB_G0274105. glgB.

    Phylogenomic databases

    eggNOGi COG0296.
    KOi K00700.
    OMAi GPRGTHD.
    PhylomeDBi Q555Q9.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Miscellaneous databases

    PROi Q555Q9.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AX4.
    2. "The genome of the social amoeba Dictyostelium discoideum."
      Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
      , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
      Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AX4.

    Entry informationi

    Entry nameiGLGB_DICDI
    AccessioniPrimary (citable) accession number: Q555Q9
    Secondary accession number(s): Q8T189
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 8, 2008
    Last sequence update: May 24, 2005
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Dictyostelium discoideum
      Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    4. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3