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Reviewed, UniProtKB/Swiss-Prot Q55587 (Y335_SYNY3)

Last modified November 24, 2009. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein sll0335
Gene names
Ordered Locus Names: sll0335
OrganismSynechocystis sp. (strain PCC 6803) [Complete proteome] [HAMAP]
Taxonomic identifier1148 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaChroococcalesSynechocystis

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

General annotation (Comments)

Sequence similarities

To M.tuberculosis RV2411c.

Sequence caution

The sequence BAA00892.1 differs from that shown. Reason: Frameshift at position 309.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 481481Uncharacterized protein sll0335
PRO_0000157870

Sequences

Sequence LengthMass (Da)Tools
Q55587-1 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: BC28A67FC82B759F

FASTA48153,732
        10         20         30         40         50         60 
MQLQSYDPGN FYDELFFAPG QPRPQAAPLI DWMGQLSPEI LRQHHETAQI ALFNLGVTFR 

        70         80         90        100        110        120 
VYNDDQGVER IFPVDIIPRI IAEAEWRSLE KGLKQRIKAL NCFLTDIYGP QNIVKDGIVP 

       130        140        150        160        170        180 
LDIVESASGF LKPCIGIKPP AGVWCHITGT DLVRDGAGKW FVLEDNLRVP SGISYVLENR 

       190        200        210        220        230        240 
RVMKSTFPDM FQTIPIQPVD SYPSQLLETL LNLAPPHLAA PVVVVLTPGI NNSAYFEHSF 

       250        260        270        280        290        300 
LAQQMGVELV EGRDLVVADG YLQMRTTKGL QRVDVVYRRL DDDFIDPEVF RPDSLLGVPG 

       310        320        330        340        350        360 
LMEVYRQGRV ALANAPGTGV ADDKVIYAYV PEMINYYLKE EPLLANVPTY LCWREEDRNY 

       370        380        390        400        410        420 
VLDHLAELVV KSANEAGGYG MLMGPSASPQ ERAQFAERIR HNPRNYIAQP VLNLSRVPTL 

       430        440        450        460        470        480 
IGDQVEGRHV DLRPYILNRG DEIYVHPGGL TRVALRKGSL VVNSSQGGGS KDTWVLQGST 


Q 

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References

« Hide 'large scale' references
[1]"Gene encoding a putative zinc finger protein in Synechocystis PCC6803."
Ogura Y., Yoshida T., Nakamura Y., Takemura M., Oda K., Ohyama K.
Agric. Biol. Chem. 55:2259-2264(1991) [PubMed: 1368738] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed: 8590279] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed: 8905231] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

S77740 Genomic DNA. Translation: AAC60396.1. Frameshift.
S77740 Genomic DNA. Translation: AAC60397.1. Frameshift.
D10004 Genomic DNA. Translation: BAA00891.1. Frameshift.
D10004 Genomic DNA. Translation: BAA00892.1. Frameshift.
BA000022 Genomic DNA. Translation: BAA10093.1.
PIRS76115.
RefSeqNP_442023.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ55587.

Genome annotation databases

GeneID952746.
GenomeReviewsGene locus sll0335 in contig BA000022_GR.
KEGGsyn:sll0335.
NMPDRfig|1148.1.peg.2124.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ55587.
OMAAYFEHSF

Enzyme and pathway databases

BioCycSSP1148:SLL0335-MON.

Family and domain databases

InterProIPR007297. DUF404_bac_N.
IPR007302. DUF407.
IPR016450. UCP005522.
[Graphical view]
PfamPF04169. DUF404. 1 hit.
PF04174. DUF407. 1 hit.
[Graphical view]
PIRSFPIRSF005522. UCP005522. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY335_SYNY3
AccessionPrimary (citable) accession number: Q55587
Secondary accession number(s): Q57032 expand/collapse secondary AC list , Q57054, Q79F81, Q79F82
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 24, 2009
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents