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Q55576 (Q55576_SYNY3) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 91. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:slr0359 EMBL BAA10080.1
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length1244 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q55576 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 23D80BD015ECF559

FASTA1,244141,662
        10         20         30         40         50         60 
MDKGGKTYNL AMIPGDVVTP GTPFFAQMPW MNIWSRFKFP PMPWWVAKQR SLGGLSLTPS 

        70         80         90        100        110        120 
LWELERDNQE RKPTATNLEH RQQREIDQLK RQLLEAEQAK EKLARELAQH QNSPSQPPPP 

       130        140        150        160        170        180 
VSGLQTALAR LGQWGILSRD LYGFFDQATE LIRTALGVDY CGLWELLPNR SALVLCAGDG 

       190        200        210        220        230        240 
WDKALVGNYT IDATNRSYAG YTIQHNGDRR MEDYEPIVEL DLRISTKFRA SPLLHNLGIV 

       250        260        270        280        290        300 
SGINLMVAGP RTAFGVLGVY SLTARKFTEE EIEFLKVASH ILAAAIDRQE YEERLLLLQQ 

       310        320        330        340        350        360 
AIDASSNGIL ITDALGSDNA VVYANQGFET ITGFNREEVI GQNCRFLLNE DRQGEQNKQL 

       370        380        390        400        410        420 
EKLRTAIAHG QECEVVLKNY RKDGASFWNH LYLSPIYNQQ NFLVNFIGIQ TDVTQQKLAE 

       430        440        450        460        470        480 
QQLRASEEFF SSMIVTITDG LLIVDQEGII QFVNPAAREM FKRQEGELLQ QPFGIPFVAD 

       490        500        510        520        530        540 
QATEITLTPL DGSMVVAEMR VSPIHWQKGK AFLVSLRDIT EQHQARLALA ESEKKYRYIV 

       550        560        570        580        590        600 
ELTSEGIWIL DQDQQTTFAN QQLADMLGYS VQEILEKNIT AFVLVIHHLP ESQNSHQKTL 

       610        620        630        640        650        660 
QSFPRCVLPN HGQVYDVQFQ RRDGSVLWGL VSRSAWYDQW GNYRGELAML TDITKRKSAE 

       670        680        690        700        710        720 
QALSASEQRL EGILGSIQDV VWSADAVSFA TLYLNPTTAM VYGQSLEVCY QSQNFWFEQV 

       730        740        750        760        770        780 
HPGDRLLLEY HLQLLMEKDQ TELEYRIVQP GGKERWLFRR SQLVRDGEHQ PLRIDSIDSD 

       790        800        810        820        830        840 
ITERKLAAEK LHYNANHDSL TNLPNRSMFL DRLGHALQRN LRRRDLRFAV LFLDLDGFKI 

       850        860        870        880        890        900 
INDSLGHSCG DLLLQGIAHR LRQCLRPEDT LARLGGDEFT MLIENITCPE DVIAVAQRIH 

       910        920        930        940        950        960 
QELQKPFNLN GQEIFTNTSI GIALNHPHYG HPQDVLRDAD TAMYRAKAAG KGRYAIFNQT 

       970        980        990       1000       1010       1020 
MHHHAVQRLQ RENDLRRAID RQELQLHYQP IVCLKTGQLQ GVEALVRWQH PEEGLILPEE 

      1030       1040       1050       1060       1070       1080 
FVAIAEETGL IVPMGDWILW EASRQILELK QSFPQLSHLQ VSINVSSRQL RDQRLLKTVD 

      1090       1100       1110       1120       1130       1140 
EILSSTNLAP QDLKLEITES LLIDNLNLAA DVLKSLRQRN IQISLDDFGT GYSSLSYLHR 

      1150       1160       1170       1180       1190       1200 
FPINTIKVDR SFVNTMEPNN QNTAIVHTIV TLAHTLGLDV IAEGIETERH LTQLHWLGCD 

      1210       1220       1230       1240 
AGQGYYFARP IPSEDLLDFL TIQIPRWSVP AVTECHGDRK EPFS 

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References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10080.1.
PIRS76102.
RefSeqNP_442010.1. NC_000911.1.
YP_005652070.1. NC_017277.1.
YP_007451890.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55576.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55576. 6 interactions.
STRING1148.slr0359.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10080; BAA10080; BAA10080.
GeneID952715.
KEGGsyn:slr0359.
syy:SYNGTS_2117.
syz:MYO_121370.
PATRIC23841594. VBISynSp132158_2345.

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000054758.
OMAEFKVIND.
PhylomeDBQ55576.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 1 hit.
PF13426. PAS_9. 2 hits.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 4 hits.
SM00091. PAS. 4 hits.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 4 hits.
PS50112. PAS. 4 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ55576_SYNY3
AccessionPrimary (citable) accession number: Q55576
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)