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Q55563

- Y163_SYNY3

UniProt

Q55563 - Y163_SYNY3

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Protein
Uncharacterized WD repeat-containing protein sll0163
Gene
sll0163
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized WD repeat-containing protein sll0163
Gene namesi
Ordered Locus Names:sll0163
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 16931693Uncharacterized WD repeat-containing protein sll0163
PRO_0000051517Add
BLAST

Proteomic databases

PaxDbiQ55563.

Interactioni

Protein-protein interaction databases

IntActiQ55563. 2 interactions.
STRINGi1148.sll0163.

Structurei

3D structure databases

ProteinModelPortaliQ55563.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati1008 – 104235WD 1
Add
BLAST
Repeati1053 – 108331WD 2
Add
BLAST
Repeati1094 – 112431WD 3
Add
BLAST
Repeati1135 – 116531WD 4
Add
BLAST
Repeati1176 – 120631WD 5
Add
BLAST
Repeati1217 – 124731WD 6
Add
BLAST
Repeati1258 – 128831WD 7
Add
BLAST
Repeati1299 – 132931WD 8
Add
BLAST
Repeati1340 – 137031WD 9
Add
BLAST
Repeati1381 – 141131WD 10
Add
BLAST
Repeati1422 – 145231WD 11
Add
BLAST
Repeati1463 – 149331WD 12
Add
BLAST
Repeati1504 – 153431WD 13
Add
BLAST
Repeati1545 – 157531WD 14
Add
BLAST
Repeati1586 – 161631WD 15
Add
BLAST
Repeati1627 – 165731WD 16
Add
BLAST

Sequence similaritiesi

Contains 16 WD repeats.

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiCOG2319.
OrthoDBiEOG66F036.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
2.130.10.10. 3 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR011990. TPR-like_helical.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 16 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 16 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiPS00678. WD_REPEATS_1. 8 hits.
PS50082. WD_REPEATS_2. 15 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55563-1 [UniParc]FASTAAdd to Basket

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MTVMLSCLTQ QQELLQSLAD RVGQPAIQDN LYFCLAGQFT WVEDWYTTAI     50
AGDVLIFDAG EKEQLARVLQ QWEQFTGHVI LITGLTEEPD PQTFLTQLAL 100
GKQQRCGERH FHWIVLVDPT IEEAFRGLQT FLDGKSHWLD LRLGVGDLEQ 150
CTDELWQCVW LEPSPLAPEK RQEMLVNLPH WLAEIVDQKQ NLELEPISLL 200
QAKLSLLQGL ARESRGEMGR KQAQCHYRES LDVWELLGDT EAIIWLSLRL 250
GYLFLLQAYG EKSRGHQLWQ QTRNYAQTAI AALENQQWHF THGETLNLLG 300
EILRGLEDWE QLRQAAENSL IFFYQLSPFA ATDTTPERNQ EKLWTELELQ 350
GLISLAHSYL CEALVEQWKF DEGKEALKRA FETRPKQVEE RDYRPCLANL 400
HYLAGRVQLA NDQIRESLMT LRQAQTLVSF EDNPRLYLAI LVELRECYLQ 450
LEDWLAALAI DQEYQAREYR LGQRAFIGPK PLPCWPEQRI CRHPLAPEKM 500
LGGGAEARSA VQSKTMVSLT WQDLQKVWEQ KPTPVLVLTG EPGVGKTSWL 550
AGEVLQQMSP ERVLLVDFTP HWAEKLWVHL GESFSLPSLG QATTPELVSA 600
LQALPILDLL LVLDGENGSL PWQKSPSLRQ QELAQVLWQW LLTTSPSQGV 650
RLLISVPPTA IADLYEELKG QLGEEHSLPP LQYQTLSPPT LGQAENWLTQ 700
AMAQCRHPWP PSLQSQFLGD LAMEGNGEQQ PWLHPIDLQL LGTVLEQEQV 750
TKSADYQGKK LDEWLTLAVQ TYLAFLPPHL LKKALQLLKS LADGQQALCL 800
KTEYQLLAAL YSAPEPAADN PPEFAQEDIQ QLQLLLTLLL RGRLIIVISQ 850
ATLPYYRLST THLAHALQGK SAVISTPALI NAGRRGSKSN PNLIAPSPGD 900
RQQGNEDLIA ELEAGSSAEE QVVAQKLKAA QLQYQKLVAG INLEKQCQFI 950
LKQFLVYPLE ALLAAVKTGQ DLQKLVTPET PLVQYPSLAP WLSLHSILAR 1000
INECNRCHHE GPVTVLRISP SMENTPPLVL TATTNGIAYL WSFHGELINV 1050
LRGHQEAITA LDWSADGQYF ATASADHTVK LWQRHGEEVA TLRGHEDWVR 1100
SVHFSPHHQF LVTSGQDNTA RIWNFAGEQL TLCQGHADWV RNAEFNCHGQ 1150
ILLTASRDGT ARLWDLEGRE IGLCQGHTSW VRNAQFSPDG QWIVTCSADG 1200
TARLWDLSSQ CFAVLKGHQN WVNNALWSPD GQHIITSSSD GTARVWSRHG 1250
KCLGTLRGHD HNIHGARFSL DGQKIVTYST DNTARLWTKE GTLLTILRGH 1300
QKEVYDADFS ADGRFVFTVS ADQTARQWDI SQKDTITLTG HSHWVRNAHF 1350
NPKGDRLLTV SRDKTARLWT TEGECVAVLA DHQGWVREGQ FSPDGQWIVT 1400
GSADKTAQLW NVLGKKLTVL RGHQDAVLNV RFSPDSQYIV TASKDGTARV 1450
WNNTGRELAV LRHYEKNIFA AEFSADGQFI VTASDDNTAG IWEIVGREVG 1500
ICRGHEGPVY FAQFSADSRY ILTASVDNTA RIWDFLGRPL LTLAGHQSIV 1550
YQARFSPEGN LIATVSADHT ARLWDRSGKT VAVLYGHQGL VGTVDWSPDG 1600
QMLVTASNDG TARLWDLSGR ELLTLEGHGN WVRSAEFSPD GRWVLTSSAD 1650
GTAKLWPVKT LPQLLSQGGQ WLKNYLTHNA LVSPADRPGA KVT 1693
Length:1,693
Mass (Da):189,935
Last modified:November 1, 1996 - v1
Checksum:i0977A827A0251CFF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10064.1.
PIRiS76086.
RefSeqiNP_441994.1. NC_000911.1.
YP_005652054.1. NC_017277.1.
YP_007451874.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10064; BAA10064; BAA10064.
GeneIDi952766.
KEGGisyn:sll0163.
syy:SYNGTS_2101.
syz:MYO_121210.
PATRICi23841554. VBISynSp132158_2325.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10064.1 .
PIRi S76086.
RefSeqi NP_441994.1. NC_000911.1.
YP_005652054.1. NC_017277.1.
YP_007451874.1. NC_020286.1.

3D structure databases

ProteinModelPortali Q55563.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q55563. 2 interactions.
STRINGi 1148.sll0163.

Proteomic databases

PaxDbi Q55563.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10064 ; BAA10064 ; BAA10064 .
GeneIDi 952766.
KEGGi syn:sll0163.
syy:SYNGTS_2101.
syz:MYO_121210.
PATRICi 23841554. VBISynSp132158_2325.

Phylogenomic databases

eggNOGi COG2319.
OrthoDBi EOG66F036.

Family and domain databases

Gene3Di 1.25.40.10. 1 hit.
2.130.10.10. 3 hits.
InterProi IPR020472. G-protein_beta_WD-40_rep.
IPR011990. TPR-like_helical.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF00400. WD40. 16 hits.
[Graphical view ]
PRINTSi PR00320. GPROTEINBRPT.
SMARTi SM00320. WD40. 16 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 2 hits.
PROSITEi PS00678. WD_REPEATS_1. 8 hits.
PS50082. WD_REPEATS_2. 15 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY163_SYNY3
AccessioniPrimary (citable) accession number: Q55563
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi