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Protein

Uncharacterized glycosyltransferase sll0501

Gene

sll0501

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT2. Glycosyltransferase Family 2.
TCDBi4.D.2.1.9. the glycosyl transferase 2 (gt2) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized glycosyltransferase sll0501 (EC:2.4.-.-)
Gene namesi
Ordered Locus Names:sll0501
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei230 – 250HelicalSequence analysisAdd BLAST21
Transmembranei264 – 284HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000592101 – 318Uncharacterized glycosyltransferase sll0501Add BLAST318

Proteomic databases

PRIDEiQ55487.

Structurei

Secondary structure

1318
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi5 – 13Combined sources9
Turni15 – 17Combined sources3
Helixi18 – 29Combined sources12
Helixi30 – 32Combined sources3
Beta strandi36 – 42Combined sources7
Beta strandi46 – 48Combined sources3
Helixi49 – 59Combined sources11
Beta strandi63 – 70Combined sources8
Helixi74 – 83Combined sources10
Beta strandi87 – 92Combined sources6
Helixi103 – 112Combined sources10
Beta strandi116 – 122Combined sources7
Helixi134 – 139Combined sources6
Turni140 – 143Combined sources4
Helixi145 – 149Combined sources5
Beta strandi151 – 153Combined sources3
Beta strandi159 – 162Combined sources4
Helixi163 – 168Combined sources6
Helixi173 – 180Combined sources8
Helixi182 – 186Combined sources5
Beta strandi188 – 195Combined sources8
Helixi209 – 220Combined sources12
Helixi226 – 247Combined sources22
Helixi250 – 254Combined sources5
Helixi262 – 295Combined sources34
Beta strandi303 – 309Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5EKEX-ray3.00A/B/C/D2-318[»]
5EKPX-ray3.19A/B/C/D2-318[»]
ProteinModelPortaliQ55487.
SMRiQ55487.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiQ55487.
KOiK20534.
OMAiKLWNFAI.
PhylomeDBiQ55487.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

Q55487-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIELSIVIP MYNEEDNLEH LFARLLEVLT PLKITYEIIC VNDGSKDKTL
60 70 80 90 100
KQLIDCYQSN RQIKIVNLSR NFGKEIALSA GIDYAQGNAV IPIDADLQDP
110 120 130 140 150
PELIHELVDK WREGYDIVYA TRRSRQGETW VKQFTAKMFY KVIGRMTEIK
160 170 180 190 200
IPPNTGDFRL MDRKVVNAIK QLPERTRFMK GLFAWVGYRQ TFVLFDREPR
210 220 230 240 250
FQGQTKWNYW KLWNFALDGI FSFSLLPLKV WTYLGSIISL LSLAYASFLI
260 270 280 290 300
LKTITLGVDV PGYASLMVAI LFLGGVQLIS LGVIGEYLGR VYEEVKARPL
310
YLVSDLWGLE YLPLEKLN
Length:318
Mass (Da):36,668
Last modified:November 1, 1997 - v1
Checksum:i670F5BB8FD8CECE7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10834.1.
PIRiS75987.

Genome annotation databases

EnsemblBacteriaiBAA10834; BAA10834; BAA10834.
KEGGisyn:sll0501.
PATRICi23843280. VBISynSp132158_3178.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10834.1.
PIRiS75987.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5EKEX-ray3.00A/B/C/D2-318[»]
5EKPX-ray3.19A/B/C/D2-318[»]
ProteinModelPortaliQ55487.
SMRiQ55487.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT2. Glycosyltransferase Family 2.
TCDBi4.D.2.1.9. the glycosyl transferase 2 (gt2) family.

Proteomic databases

PRIDEiQ55487.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10834; BAA10834; BAA10834.
KEGGisyn:sll0501.
PATRICi23843280. VBISynSp132158_3178.

Phylogenomic databases

InParanoidiQ55487.
KOiK20534.
OMAiKLWNFAI.
PhylomeDBiQ55487.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY501_SYNY3
AccessioniPrimary (citable) accession number: Q55487
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.