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Q55486

- SYR_SYNY3

UniProt

Q55486 - SYR_SYNY3

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 104 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligase (EC:6.1.1.19)
    Alternative name(s):
    Arginyl-tRNA synthetase
    Short name:
    ArgRS
    Gene namesi
    Name:argS
    Ordered Locus Names:sll0502
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 584584Arginine--tRNA ligasePRO_0000151627Add
    BLAST

    Proteomic databases

    PaxDbiQ55486.
    PRIDEiQ55486.

    Interactioni

    Subunit structurei

    Monomer.By similarity

    Protein-protein interaction databases

    IntActiQ55486. 3 interactions.
    STRINGi1148.sll0502.

    Structurei

    3D structure databases

    ProteinModelPortaliQ55486.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi126 – 13611"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247212.
    KOiK01887.
    OMAiDIMAESA.
    OrthoDBiEOG6JB13C.
    PhylomeDBiQ55486.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001412. aa-tRNA-synth_I_CS.
    IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.
    PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q55486-1 [UniParc]FASTAAdd to Basket

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    MVSILTQLND HFAQALEGQF PSDVTLPTPL VVPASNPKFG DFQCNIALPL    50
    AKQLGQPPRA IAMEIVDKVN LSEICEPLTI AGPGFINIKL LPDYLGEQLI 100
    KLQQNQQLGV SLVKGEERIV VDFSSPNIAK EMHVGHLRST IIGDCLARVL 150
    EFRGYDVLRL NHVGDWGTQF GMLITYLKEV YPEALVTADA LDIGDLVTFY 200
    KQAKQRFDQD EQFRETSRQA VVALQAGDAK SIKAWQLLCE QSRREFQLIY 250
    DCLDITIEER GESFYNPFLP GVVELLQEKD LLVEDNGAQC VFLDGFTNKD 300
    GDRLPLIVQK SDGGYNYATT DLAALNYRLN TDGAEKIIYV TDAGQANHFA 350
    QFFQVAEKAG ILTDPTQVVH VPFGLVKGED GKKLKTRAGD TIRLKDLLTE 400
    AVTRARQDLE TRLTAEERSE TEEFKTEVAQ RVGIGAVKYA DLSQNRTSDY 450
    VFSFDKMLAL QGNTAPYMLY AYARIQSISR EGGIDFAQMD SGEIVLTEPT 500
    ELVLAKNLLQ FADVIETVEI SLLPNRLCDY LYELSKVFNR FYENCPVLKA 550
    SDPQRGSRLL LCDLTARTLK LGLSLLGIPV LDRM 584
    Length:584
    Mass (Da):65,213
    Last modified:November 1, 1997 - v1
    Checksum:i89602A1A5A3BD85B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10833.1.
    PIRiS75986.
    RefSeqiNP_442762.1. NC_000911.1.
    YP_005652823.1. NC_017277.1.
    YP_007452638.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10833; BAA10833; BAA10833.
    GeneIDi953297.
    KEGGisyn:sll0502.
    syy:SYNGTS_2870.
    syz:MYO_128960.
    PATRICi23843278. VBISynSp132158_3177.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10833.1 .
    PIRi S75986.
    RefSeqi NP_442762.1. NC_000911.1.
    YP_005652823.1. NC_017277.1.
    YP_007452638.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali Q55486.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q55486. 3 interactions.
    STRINGi 1148.sll0502.

    Proteomic databases

    PaxDbi Q55486.
    PRIDEi Q55486.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10833 ; BAA10833 ; BAA10833 .
    GeneIDi 953297.
    KEGGi syn:sll0502.
    syy:SYNGTS_2870.
    syz:MYO_128960.
    PATRICi 23843278. VBISynSp132158_3177.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247212.
    KOi K01887.
    OMAi DIMAESA.
    OrthoDBi EOG6JB13C.
    PhylomeDBi Q55486.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001412. aa-tRNA-synth_I_CS.
    IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
      Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
      DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27184 / PCC 6803 / N-1.
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiSYR_SYNY3
    AccessioniPrimary (citable) accession number: Q55486
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 104 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3