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Q55486

- SYR_SYNY3

UniProt

Q55486 - SYR_SYNY3

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligase (EC:6.1.1.19)
Alternative name(s):
Arginyl-tRNA synthetase
Short name:
ArgRS
Gene namesi
Name:argS
Ordered Locus Names:sll0502
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 584584Arginine--tRNA ligasePRO_0000151627Add
BLAST

Proteomic databases

PaxDbiQ55486.
PRIDEiQ55486.

Interactioni

Subunit structurei

Monomer.By similarity

Protein-protein interaction databases

IntActiQ55486. 3 interactions.
STRINGi1148.sll0502.

Structurei

3D structure databases

ProteinModelPortaliQ55486.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi126 – 13611"HIGH" regionAdd
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247212.
InParanoidiQ55486.
KOiK01887.
OMAiDIMAESA.
OrthoDBiEOG6JB13C.
PhylomeDBiQ55486.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55486-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVSILTQLND HFAQALEGQF PSDVTLPTPL VVPASNPKFG DFQCNIALPL
60 70 80 90 100
AKQLGQPPRA IAMEIVDKVN LSEICEPLTI AGPGFINIKL LPDYLGEQLI
110 120 130 140 150
KLQQNQQLGV SLVKGEERIV VDFSSPNIAK EMHVGHLRST IIGDCLARVL
160 170 180 190 200
EFRGYDVLRL NHVGDWGTQF GMLITYLKEV YPEALVTADA LDIGDLVTFY
210 220 230 240 250
KQAKQRFDQD EQFRETSRQA VVALQAGDAK SIKAWQLLCE QSRREFQLIY
260 270 280 290 300
DCLDITIEER GESFYNPFLP GVVELLQEKD LLVEDNGAQC VFLDGFTNKD
310 320 330 340 350
GDRLPLIVQK SDGGYNYATT DLAALNYRLN TDGAEKIIYV TDAGQANHFA
360 370 380 390 400
QFFQVAEKAG ILTDPTQVVH VPFGLVKGED GKKLKTRAGD TIRLKDLLTE
410 420 430 440 450
AVTRARQDLE TRLTAEERSE TEEFKTEVAQ RVGIGAVKYA DLSQNRTSDY
460 470 480 490 500
VFSFDKMLAL QGNTAPYMLY AYARIQSISR EGGIDFAQMD SGEIVLTEPT
510 520 530 540 550
ELVLAKNLLQ FADVIETVEI SLLPNRLCDY LYELSKVFNR FYENCPVLKA
560 570 580
SDPQRGSRLL LCDLTARTLK LGLSLLGIPV LDRM
Length:584
Mass (Da):65,213
Last modified:November 1, 1997 - v1
Checksum:i89602A1A5A3BD85B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10833.1.
PIRiS75986.
RefSeqiNP_442762.1. NC_000911.1.
YP_005652823.1. NC_017277.1.
YP_007452638.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10833; BAA10833; BAA10833.
GeneIDi953297.
KEGGisyn:sll0502.
syy:SYNGTS_2870.
syz:MYO_128960.
PATRICi23843278. VBISynSp132158_3177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10833.1 .
PIRi S75986.
RefSeqi NP_442762.1. NC_000911.1.
YP_005652823.1. NC_017277.1.
YP_007452638.1. NC_020286.1.

3D structure databases

ProteinModelPortali Q55486.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q55486. 3 interactions.
STRINGi 1148.sll0502.

Proteomic databases

PaxDbi Q55486.
PRIDEi Q55486.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10833 ; BAA10833 ; BAA10833 .
GeneIDi 953297.
KEGGi syn:sll0502.
syy:SYNGTS_2870.
syz:MYO_128960.
PATRICi 23843278. VBISynSp132158_3177.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247212.
InParanoidi Q55486.
KOi K01887.
OMAi DIMAESA.
OrthoDBi EOG6JB13C.
PhylomeDBi Q55486.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiSYR_SYNY3
AccessioniPrimary (citable) accession number: Q55486
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 29, 2014
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3