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Protein

Putative methyl-accepting chemotaxis protein sll0041

Gene

sll0041

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transducer

Names & Taxonomyi

Protein namesi
Recommended name:
Putative methyl-accepting chemotaxis protein sll0041
Gene namesi
Ordered Locus Names:sll0041
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10001000Putative methyl-accepting chemotaxis protein sll0041PRO_0000110571Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiQ55445. 12 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ55445.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini342 – 478137GAF 1Add
BLAST
Domaini509 – 650142GAF 2Add
BLAST
Domaini671 – 72252HAMPPROSITE-ProRule annotationAdd
BLAST
Domaini727 – 963237Methyl-accepting transducerPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the phytochrome family.Curated
Contains 2 GAF domains.Curated
Contains 1 HAMP domain.PROSITE-ProRule annotation
Contains 1 methyl-accepting transducer domain.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000069560.
KOiK11525.

Family and domain databases

Gene3Di3.30.450.40. 2 hits.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003018. GAF.
IPR029016. GAF_dom-like.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR016132. Phyto_chromo_attachment.
[Graphical view]
PfamiPF01590. GAF. 2 hits.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00065. GAF. 2 hits.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50046. PHYTOCHROME_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55445-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQNPSSDRR PDTAQSVANG ETLDGALFTG LTDTAAAQDE SSETSASFAT
60 70 80 90 100
IDGEDKSEVG DALDWFSDGK ETDINGDEAD RGIQADTQAK TLVSLENLTE
110 120 130 140 150
EPEIDGAEFM AEAFIAENTA VEDVSPNPNP AIDTDALAAL TQSAVELTPP
160 170 180 190 200
PPINLPKVEL PPMQPLAPLM AIADPDNLSP MSTSIQAPTQ SGGLSLRNKA
210 220 230 240 250
VLIALLIGLI PAGVIGGLNL SSVDRLPVPQ TEQQVKDSTT KQIRDQILIG
260 270 280 290 300
LLVTAVGAAF VAYWMVGENT KAQTALALKA KHSHRNLDQP LAVAGDELAI
310 320 330 340 350
ADQTIDALSA QVEKLRHQQD LSLKQAELLT ELSRANLSDI DEIQGVIQKN
360 370 380 390 400
LDQARALFGC ERLVFYYHPR YQPEAMVVQA LDLTTQGLID SKDPHPWGQE
410 420 430 440 450
DMPSQIVAIN DTSGASISNP HRQWLEQHQV KASLTVPLHR DNYPLGLLMA
460 470 480 490 500
HHCQRPHQWE MRERQFLQQL TEELQTTLDR ANLIQERNES AQQAQILKEL
510 520 530 540 550
TLKISAAINS EQVFDIAAQE IRLALKADRV IVYRFDATWA GTVIVESVAE
560 570 580 590 600
GYPKALGATI ADPCFADSYV EKYRSGRIQA TRDIYNAGLT PCHIGQLKPF
610 620 630 640 650
EVKANLVAPI NYKGNLLGLL IAHQCSGPRD WHQNEIDLFG QLTVQVGLAL
660 670 680 690 700
ERSDLLAQQK IAEVEQRQMR EKMQKRALEL LMEVDPVSRG DLTIRAHVTE
710 720 730 740 750
DEIGTIADSY NATIESLRRI VTQVQTAASQ FTETTDTNEV AVRQLAQQAN
760 770 780 790 800
RQALDVAEAL ERLQAMNKSI QAVAENAAQA ESAVQRATQT VDQGEDAMNR
810 820 830 840 850
TVDGIVAIRE TVAATAKQVK RLGESSQKIS KVVNLIGSFA DQTNLLALNA
860 870 880 890 900
AIEAAHAGEE GRGFAVVADE VRSLARQSAE ATAEIAQLVA TIQAETNEVV
910 920 930 940 950
NAMEAGTEQV VVGTKLVEET RRSLNQITAV SAQISGLVEA ITSAAIEQSQ
960 970 980 990 1000
TSESVTQTMA LVAQIADKNS SEASGVSATF KELLAVAQSL QEAVKQFKVQ
Length:1,000
Mass (Da):108,335
Last modified:August 14, 2001 - v2
Checksum:i58C5A765E1275FDF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10787.2.
PIRiS75940.

Genome annotation databases

EnsemblBacteriaiBAA10787; BAA10787; BAA10787.
KEGGisyn:sll0041.
PATRICi23843178. VBISynSp132158_3127.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10787.2.
PIRiS75940.

3D structure databases

ProteinModelPortaliQ55445.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ55445. 12 interactions.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10787; BAA10787; BAA10787.
KEGGisyn:sll0041.
PATRICi23843178. VBISynSp132158_3127.

Phylogenomic databases

HOGENOMiHOG000069560.
KOiK11525.

Family and domain databases

Gene3Di3.30.450.40. 2 hits.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003018. GAF.
IPR029016. GAF_dom-like.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR016132. Phyto_chromo_attachment.
[Graphical view]
PfamiPF01590. GAF. 2 hits.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00065. GAF. 2 hits.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50046. PHYTOCHROME_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY041_SYNY3
AccessioniPrimary (citable) accession number: Q55445
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 14, 2001
Last sequence update: August 14, 2001
Last modified: September 7, 2016
This is version 104 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.