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Q55427 (Q55427_SYNY3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:slr0842 EMBL BAA10527.1
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q55427 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 1EEC6F051FE238C1

FASTA40445,469
        10         20         30         40         50         60 
MNPSNAQLTA RRYRAGDPIF SEGDQGNFAY IIEEGQVEIW TELNGDRRVL NVLQPGSLFG 

        70         80         90        100        110        120 
ELALVDAKPR SASASALTDC ILSLVTPDQV NQRIDTADPI LRLLLLVVIG HFRSESNNFR 

       130        140        150        160        170        180 
GTTEPALVLD AALTKTKLSL KERITDAVDM IRLEGEMKEA IAKEQFHLVY QPIVFMDDLR 

       190        200        210        220        230        240 
IEGFEALIRW QSPKRGFVRP DRFIEVAEAT DLIIPIGQWV IEQGLKDLKT FQTKFNPHLL 

       250        260        270        280        290        300 
MSFNIVGRQT NSEDFVPWLL EKVDHYGLTP DKVKLEIIER TLFSGESSAP WIENCRSQGF 

       310        320        330        340        350        360 
ALVLDDFGTG YSSLQYLNEY KIDRVKIDKS FVDGLGTNQN SESICSAILQ LSHALGMTVV 

       370        380        390        400 
AEGIETQAQL EILQSLGCDY GQGYLFSRPL RFDQVMVLDQ DAFR 

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References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10527.1.
PIRS75792.
RefSeqNP_442457.1. NC_000911.1.
YP_005652518.1. NC_017277.1.
YP_007452333.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55427.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.slr0842.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10527; BAA10527; BAA10527.
GeneID12253830.
14618014.
952367.
KEGGsyn:slr0842.
syy:SYNGTS_2565.
syz:MYO_125900.
PATRIC23842620. VBISynSp132158_2849.

Phylogenomic databases

eggNOGCOG0664.
HOGENOMHOG000035947.
OMARICVEIT.
PhylomeDBQ55427.
ProtClustDBCLSK893569.

Family and domain databases

Gene3D2.60.120.10. 1 hit.
3.20.20.450. 1 hit.
InterProIPR002373. cAMP/cGMP_kin.
IPR018490. cNMP-bd-like.
IPR018488. cNMP-bd_CS.
IPR000595. cNMP-bd_dom.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
PfamPF00027. cNMP_binding. 1 hit.
PF00563. EAL. 1 hit.
[Graphical view]
PRINTSPR00103. CAMPKINASE.
SMARTSM00100. cNMP. 1 hit.
SM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEPS00889. CNMP_BINDING_2. 1 hit.
PS50042. CNMP_BINDING_3. 1 hit.
PS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ55427_SYNY3
AccessionPrimary (citable) accession number: Q55427
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)