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Protein

Putative amidase

Gene

sll0828

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

A monocarboxylic acid amide + H2O = a monocarboxylate + NH3.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei121 – 1211Charge relay systemBy similarity
Active sitei196 – 1961Charge relay systemBy similarity
Active sitei220 – 2201Acyl-ester intermediateBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciSSP1148:GJOT-2607-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative amidase (EC:3.5.1.4)
Gene namesi
Ordered Locus Names:sll0828
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 506506Putative amidasePRO_0000105262Add
BLAST

Proteomic databases

PaxDbiQ55424.

Interactioni

Protein-protein interaction databases

IntActiQ55424. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ55424.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the amidase family.Curated

Phylogenomic databases

eggNOGiCOG0154.
HOGENOMiHOG000116697.
InParanoidiQ55424.
KOiK01426.
OMAiSTRFPYT.
OrthoDBiEOG6J74T1.
PhylomeDBiQ55424.

Family and domain databases

Gene3Di3.90.1300.10. 1 hit.
InterProiIPR000120. Amidase.
IPR020556. Amidase_CS.
IPR023631. Amidase_dom.
[Graphical view]
PANTHERiPTHR11895. PTHR11895. 1 hit.
PfamiPF01425. Amidase. 1 hit.
[Graphical view]
SUPFAMiSSF75304. SSF75304. 1 hit.
PROSITEiPS00571. AMIDASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55424-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRQADRESV LPDYVKVLKP LPFNFSNFSN RQLFANFKMT DFCLLSALDL
60 70 80 90 100
AQLVRTRQVS PLEITQYYLD RLGKYDQTVG SFAHVAWESA IADAKQKTKY
110 120 130 140 150
LAGMGNSEPL PPFFGVPIAV KDLNCVADMP VSYGVSALKE NLATYDDGVV
160 170 180 190 200
AKMKAAGFTI VGKTVTSQLG SFPYTEPPGF LPARNPWHLD YNAGGSSGGS
210 220 230 240 250
AAAVAAGLVP IAQGSDGGGS VRTPAACCSL VGFKPSRGRV SQAPVGDYQS
260 270 280 290 300
GIACHGPLSR TVLEAAALLD VMEGYITGDP YWLPSPDRPF VETTGETPGQ
310 320 330 340 350
LRLAYAFSLP PFSSSSEIQG AVAKVIAVCE NLGHQLEEAC FDVTSLIEPF
360 370 380 390 400
AQIWKAGVGA SGIPLPLLES VNQWLGETSG TAGDYLRGVR NMQVISRQIV
410 420 430 440 450
GFMEQYDALI LPVFNHRPPK IGEWTHLSPP DVVQKIIEWI APCPPANAAG
460 470 480 490 500
LPAIAIPVGF DDQGLPLSVQ IIGKPAADAL VLALAHQMEQ QLQGNQPRQL

PLQFMP
Length:506
Mass (Da):54,254
Last modified:November 1, 1997 - v1
Checksum:i11062B1FDB63B30A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10524.1.
PIRiS75789.

Genome annotation databases

EnsemblBacteriaiBAA10524; BAA10524; BAA10524.
KEGGisyz:MYO_125870.
PATRICi23842610. VBISynSp132158_2844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10524.1.
PIRiS75789.

3D structure databases

ProteinModelPortaliQ55424.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ55424. 1 interaction.

Proteomic databases

PaxDbiQ55424.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10524; BAA10524; BAA10524.
KEGGisyz:MYO_125870.
PATRICi23842610. VBISynSp132158_2844.

Phylogenomic databases

eggNOGiCOG0154.
HOGENOMiHOG000116697.
InParanoidiQ55424.
KOiK01426.
OMAiSTRFPYT.
OrthoDBiEOG6J74T1.
PhylomeDBiQ55424.

Enzyme and pathway databases

BioCyciSSP1148:GJOT-2607-MONOMER.

Family and domain databases

Gene3Di3.90.1300.10. 1 hit.
InterProiIPR000120. Amidase.
IPR020556. Amidase_CS.
IPR023631. Amidase_dom.
[Graphical view]
PANTHERiPTHR11895. PTHR11895. 1 hit.
PfamiPF01425. Amidase. 1 hit.
[Graphical view]
SUPFAMiSSF75304. SSF75304. 1 hit.
PROSITEiPS00571. AMIDASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiAMID_SYNY3
AccessioniPrimary (citable) accession number: Q55424
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 22, 2015
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.