Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q55424 (AMID_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative amidase

EC=3.5.1.4
Gene names
Ordered Locus Names:sll0828
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length506 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

A monocarboxylic acid amide + H2O = a monocarboxylate + NH3.

Sequence similarities

Belongs to the amidase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 506506Putative amidase
PRO_0000105262

Sites

Active site1211Charge relay system By similarity
Active site1961Charge relay system By similarity
Active site2201Acyl-ester intermediate By similarity

Sequences

Sequence LengthMass (Da)Tools
Q55424 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 11062B1FDB63B30A

FASTA50654,254
        10         20         30         40         50         60 
MRRQADRESV LPDYVKVLKP LPFNFSNFSN RQLFANFKMT DFCLLSALDL AQLVRTRQVS 

        70         80         90        100        110        120 
PLEITQYYLD RLGKYDQTVG SFAHVAWESA IADAKQKTKY LAGMGNSEPL PPFFGVPIAV 

       130        140        150        160        170        180 
KDLNCVADMP VSYGVSALKE NLATYDDGVV AKMKAAGFTI VGKTVTSQLG SFPYTEPPGF 

       190        200        210        220        230        240 
LPARNPWHLD YNAGGSSGGS AAAVAAGLVP IAQGSDGGGS VRTPAACCSL VGFKPSRGRV 

       250        260        270        280        290        300 
SQAPVGDYQS GIACHGPLSR TVLEAAALLD VMEGYITGDP YWLPSPDRPF VETTGETPGQ 

       310        320        330        340        350        360 
LRLAYAFSLP PFSSSSEIQG AVAKVIAVCE NLGHQLEEAC FDVTSLIEPF AQIWKAGVGA 

       370        380        390        400        410        420 
SGIPLPLLES VNQWLGETSG TAGDYLRGVR NMQVISRQIV GFMEQYDALI LPVFNHRPPK 

       430        440        450        460        470        480 
IGEWTHLSPP DVVQKIIEWI APCPPANAAG LPAIAIPVGF DDQGLPLSVQ IIGKPAADAL 

       490        500 
VLALAHQMEQ QLQGNQPRQL PLQFMP 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27184 / PCC 6803 / N-1.
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10524.1.
PIRS75789.
RefSeqNP_442454.1. NC_000911.1.
YP_007452330.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55424.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55424. 1 interaction.
STRING1148.sll0828.

Proteomic databases

PaxDbQ55424.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10524; BAA10524; BAA10524.
GeneID14618011.
952371.
KEGGsyn:sll0828.
syz:MYO_125870.
PATRIC23842610. VBISynSp132158_2844.

Phylogenomic databases

eggNOGCOG0154.
HOGENOMHOG000116697.
KOK01426.
OMAHASHIID.
OrthoDBEOG6J74T1.
PhylomeDBQ55424.
ProtClustDBCLSK893567.

Enzyme and pathway databases

BioCycSSP1148:GJOT-2607-MONOMER.

Family and domain databases

Gene3D3.90.1300.10. 1 hit.
InterProIPR000120. Amidase.
IPR020556. Amidase_CS.
IPR023631. Amidase_dom.
[Graphical view]
PANTHERPTHR11895. PTHR11895. 1 hit.
PfamPF01425. Amidase. 1 hit.
[Graphical view]
SUPFAMSSF75304. SSF75304. 1 hit.
PROSITEPS00571. AMIDASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameAMID_SYNY3
AccessionPrimary (citable) accession number: Q55424
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families