Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Acyl-CoA desaturase 1

Gene

desC(des9)

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-19020.

Names & Taxonomyi

Protein namesi
Submitted name:
Acyl-CoA desaturase 1Imported
Gene namesi
Name:desC(des9)Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei56 – 76HelicalSequence analysisAdd BLAST21
Transmembranei82 – 102HelicalSequence analysisAdd BLAST21
Transmembranei114 – 137HelicalSequence analysisAdd BLAST24
Transmembranei188 – 209HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiQ55406.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini78 – 289FA_desaturaseInterPro annotationAdd BLAST212

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000270353.
InParanoidiQ55406.
KOiK00507.
OMAiLIPTCKF.
PhylomeDBiQ55406.

Family and domain databases

CDDicd03505. Delta9-FADS-like. 1 hit.
InterProiIPR015876. Acyl-CoA_DS.
IPR005804. FA_desaturase_dom.
[Graphical view]
PANTHERiPTHR11351. PTHR11351. 1 hit.
PfamiPF00487. FA_desaturase. 1 hit.
[Graphical view]
PRINTSiPR00075. FACDDSATRASE.

Sequencei

Sequence statusi: Complete.

Q55406-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNPLNIEYL YLSKLFDNSL IVFNKRQLFR FFVRFFFMTA ALPNDSKPKL
60 70 80 90 100
TPAWTVIFFF TSIHLVALLA FLPQFFSWKA VGMAFLLYVI TGGIGITLGF
110 120 130 140 150
HRCISHRSFN VPKWLEYIFV ICGTLACQGG VFEWVGLHRM HHKFSDTTPD
160 170 180 190 200
PHDSNKGFWW SHIGWMMFEI PAKADIPRYT KDIQDDKFYQ FCQNNLILIQ
210 220 230 240 250
VALGLILFAL GGWPFVIWGI FVRLVFVFHF TWFVNSATHK FGYVSHESND
260 270 280 290 300
YSRNCWWVAL LTFGEGWHNN HHAYQYSARH GLQWWEVDLT WMTIKFLSLL
310
GLAKDIKLPP ETAMANKA
Length:318
Mass (Da):37,203
Last modified:November 1, 1996 - v1
Checksum:i74DFD436B6567BF2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10500.1.
PIRiS75765.

Genome annotation databases

EnsemblBacteriaiBAA10500; BAA10500; BAA10500.
KEGGisyn:sll0541.
PATRICi23842560. VBISynSp132158_2819.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10500.1.
PIRiS75765.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ55406.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10500; BAA10500; BAA10500.
KEGGisyn:sll0541.
PATRICi23842560. VBISynSp132158_2819.

Phylogenomic databases

HOGENOMiHOG000270353.
InParanoidiQ55406.
KOiK00507.
OMAiLIPTCKF.
PhylomeDBiQ55406.

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-19020.

Family and domain databases

CDDicd03505. Delta9-FADS-like. 1 hit.
InterProiIPR015876. Acyl-CoA_DS.
IPR005804. FA_desaturase_dom.
[Graphical view]
PANTHERiPTHR11351. PTHR11351. 1 hit.
PfamiPF00487. FA_desaturase. 1 hit.
[Graphical view]
PRINTSiPR00075. FACDDSATRASE.
ProtoNetiSearch...

Entry informationi

Entry nameiQ55406_SYNY3
AccessioniPrimary (citable) accession number: Q55406
Secondary accession number(s): Q55229
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.