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Q55403

- Y575_SYNY3

UniProt

Q55403 - Y575_SYNY3

Protein

Thylakoid membrane protein slr0575

Gene

slr0575

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Thylakoid membrane protein slr0575
    Gene namesi
    Ordered Locus Names:slr0575
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cellular thylakoid membrane 1 Publication; Multi-pass membrane protein 1 Publication

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. thylakoid membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Membrane, Thylakoid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 184184Thylakoid membrane protein slr0575PRO_0000352748Add
    BLAST

    Proteomic databases

    PaxDbiQ55403.

    Interactioni

    Protein-protein interaction databases

    STRINGi1148.slr0575.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei5 – 2521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei31 – 5121HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG09668.
    OMAiNLSVPTF.
    OrthoDBiEOG6HJ26K.
    PhylomeDBiQ55403.

    Family and domain databases

    InterProiIPR021275. DUF2854.
    [Graphical view]
    PfamiPF11016. DUF2854. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q55403-1 [UniParc]FASTAAdd to Basket

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    MLPKISLAAV GLTVGGILTI TGFVAYALDY ATLNLAGFFY GIPLVLGGLA    50
    LKAAELKPIP FSQPTSEKII ALRNQLATPT QNQIRKDVTR YRYGQEAHLD 100
    ESLERLGLSP TDEERPVLTS LLEQDWEGKY VLTLTFTSPF ISLETWQEKQ 150
    EKIAKFFGPD LEVTVAEPEE KVVTVNLISQ LALP 184
    Length:184
    Mass (Da):20,320
    Last modified:November 1, 1996 - v1
    Checksum:iC419300F91AE0CD2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10497.1.
    PIRiS75762.
    RefSeqiNP_442427.1. NC_000911.1.
    YP_005652488.1. NC_017277.1.
    YP_007452303.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10497; BAA10497; BAA10497.
    GeneIDi953219.
    KEGGisyn:slr0575.
    syy:SYNGTS_2535.
    syz:MYO_125600.
    PATRICi23842554. VBISynSp132158_2816.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10497.1 .
    PIRi S75762.
    RefSeqi NP_442427.1. NC_000911.1.
    YP_005652488.1. NC_017277.1.
    YP_007452303.1. NC_020286.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 1148.slr0575.

    Proteomic databases

    PaxDbi Q55403.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10497 ; BAA10497 ; BAA10497 .
    GeneIDi 953219.
    KEGGi syn:slr0575.
    syy:SYNGTS_2535.
    syz:MYO_125600.
    PATRICi 23842554. VBISynSp132158_2816.

    Phylogenomic databases

    eggNOGi NOG09668.
    OMAi NLSVPTF.
    OrthoDBi EOG6HJ26K.
    PhylomeDBi Q55403.

    Family and domain databases

    InterProi IPR021275. DUF2854.
    [Graphical view ]
    Pfami PF11016. DUF2854. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.
    2. "Proteomic studies of the thylakoid membrane of Synechocystis sp. PCC 6803."
      Srivastava R., Pisareva T., Norling B.
      Proteomics 5:4905-4916(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: SUBCELLULAR LOCATION IN THYLAKOID.

    Entry informationi

    Entry nameiY575_SYNY3
    AccessioniPrimary (citable) accession number: Q55403
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 14, 2008
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3