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Q55403 (Y575_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Thylakoid membrane protein slr0575
Gene names
Ordered Locus Names:slr0575
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length184 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Ontologies

Keywords
   Cellular componentMembrane
Thylakoid
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

thylakoid membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 184184Thylakoid membrane protein slr0575
PRO_0000352748

Regions

Transmembrane5 – 2521Helical; Potential
Transmembrane31 – 5121Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q55403 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: C419300F91AE0CD2

FASTA18420,320
        10         20         30         40         50         60 
MLPKISLAAV GLTVGGILTI TGFVAYALDY ATLNLAGFFY GIPLVLGGLA LKAAELKPIP 

        70         80         90        100        110        120 
FSQPTSEKII ALRNQLATPT QNQIRKDVTR YRYGQEAHLD ESLERLGLSP TDEERPVLTS 

       130        140        150        160        170        180 
LLEQDWEGKY VLTLTFTSPF ISLETWQEKQ EKIAKFFGPD LEVTVAEPEE KVVTVNLISQ 


LALP 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
[2]"Proteomic studies of the thylakoid membrane of Synechocystis sp. PCC 6803."
Srivastava R., Pisareva T., Norling B.
Proteomics 5:4905-4916(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION IN THYLAKOID.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10497.1.
PIRS75762.
RefSeqNP_442427.1. NC_000911.1.
YP_005652488.1. NC_017277.1.
YP_007452303.1. NC_020286.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.slr0575.

Proteomic databases

PaxDbQ55403.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10497; BAA10497; BAA10497.
GeneID12253720.
14617984.
953219.
KEGGsyn:slr0575.
syy:SYNGTS_2535.
syz:MYO_125600.
PATRIC23842554. VBISynSp132158_2816.

Phylogenomic databases

eggNOGNOG09668.
OMATRYCYGQ.
OrthoDBEOG6HJ26K.
PhylomeDBQ55403.
ProtClustDBCLSK893559.

Family and domain databases

InterProIPR021275. DUF2854.
[Graphical view]
PfamPF11016. DUF2854. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY575_SYNY3
AccessionPrimary (citable) accession number: Q55403
Entry history
Integrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names