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Q55403

- Y575_SYNY3

UniProt

Q55403 - Y575_SYNY3

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Protein
Thylakoid membrane protein slr0575
Gene
slr0575
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Thylakoid membrane protein slr0575
Gene namesi
Ordered Locus Names:slr0575
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Cellular thylakoid membrane; Multi-pass membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei5 – 2521Helical; Reviewed prediction
Add
BLAST
Transmembranei31 – 5121Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. thylakoid membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 184184Thylakoid membrane protein slr0575
PRO_0000352748Add
BLAST

Proteomic databases

PaxDbiQ55403.

Interactioni

Protein-protein interaction databases

STRINGi1148.slr0575.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG09668.
OMAiNLSVPTF.
OrthoDBiEOG6HJ26K.
PhylomeDBiQ55403.

Family and domain databases

InterProiIPR021275. DUF2854.
[Graphical view]
PfamiPF11016. DUF2854. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55403-1 [UniParc]FASTAAdd to Basket

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MLPKISLAAV GLTVGGILTI TGFVAYALDY ATLNLAGFFY GIPLVLGGLA    50
LKAAELKPIP FSQPTSEKII ALRNQLATPT QNQIRKDVTR YRYGQEAHLD 100
ESLERLGLSP TDEERPVLTS LLEQDWEGKY VLTLTFTSPF ISLETWQEKQ 150
EKIAKFFGPD LEVTVAEPEE KVVTVNLISQ LALP 184
Length:184
Mass (Da):20,320
Last modified:November 1, 1996 - v1
Checksum:iC419300F91AE0CD2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10497.1.
PIRiS75762.
RefSeqiNP_442427.1. NC_000911.1.
YP_005652488.1. NC_017277.1.
YP_007452303.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10497; BAA10497; BAA10497.
GeneIDi953219.
KEGGisyn:slr0575.
syy:SYNGTS_2535.
syz:MYO_125600.
PATRICi23842554. VBISynSp132158_2816.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10497.1 .
PIRi S75762.
RefSeqi NP_442427.1. NC_000911.1.
YP_005652488.1. NC_017277.1.
YP_007452303.1. NC_020286.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 1148.slr0575.

Proteomic databases

PaxDbi Q55403.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10497 ; BAA10497 ; BAA10497 .
GeneIDi 953219.
KEGGi syn:slr0575.
syy:SYNGTS_2535.
syz:MYO_125600.
PATRICi 23842554. VBISynSp132158_2816.

Phylogenomic databases

eggNOGi NOG09668.
OMAi NLSVPTF.
OrthoDBi EOG6HJ26K.
PhylomeDBi Q55403.

Family and domain databases

InterProi IPR021275. DUF2854.
[Graphical view ]
Pfami PF11016. DUF2854. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.
  2. "Proteomic studies of the thylakoid membrane of Synechocystis sp. PCC 6803."
    Srivastava R., Pisareva T., Norling B.
    Proteomics 5:4905-4916(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION IN THYLAKOID.

Entry informationi

Entry nameiY575_SYNY3
AccessioniPrimary (citable) accession number: Q55403
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

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