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Protein
Submitted name:

Sigma factor

Gene

crtS

Organism
Streptomyces griseus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation, Sigma factorSAAS annotation
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factorImported
Gene namesi
Name:crtSImported
OrganismiStreptomyces griseusImported
Taxonomic identifieri1911 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Structurei

3D structure databases

ProteinModelPortaliQ55358.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini56 – 69RNA_pol_sigma70InterPro annotationAdd BLAST14

Sequence similaritiesi

Belongs to the sigma-70 factor family.SAAS annotation

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiView protein in InterPro
IPR014284. RNA_pol_sigma-70_dom.
IPR014322. RNA_pol_sigma-B/F/G.
IPR000943. RNA_pol_sigma70.
IPR007627. RNA_pol_sigma70_r2.
IPR007624. RNA_pol_sigma70_r3.
IPR007630. RNA_pol_sigma70_r4.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF04542. Sigma70_r2. 1 hit.
PF04539. Sigma70_r3. 1 hit.
PF04545. Sigma70_r4. 1 hit.
PIRSFiPIRSF000770. RNA_pol_sigma-SigE/K. 3 hits.
PRINTSiPR00046. SIGMA70FCT.
SUPFAMiSSF88659. SSF88659. 2 hits.
SSF88946. SSF88946. 1 hit.
TIGRFAMsiTIGR02980. SigBFG. 1 hit.
TIGR02937. sigma70-ECF. 1 hit.
PROSITEiView protein in PROSITE
PS00715. SIGMA70_1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q55358-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDARRLSRLF FDRLQVLEEG THEYQYARNT LIEMNLSLVR FAANRFRNRG
60 70 80 90 100
SGDMEDIVQV GTIGLIKAID RFDLSREVEF TSFAVPYIVG EIKRFFRDTS
110 120 130 140 150
WAVHVPRRLQ ELRVDLAKAK ESLAGDLDRD PTVRELAQDL GIEESEVTEG
160 170 180 190 200
IVASNGYTAG SLDMPTDTAE AGPGQHSGRT FADVLGEPDP AMETVENLHA
210 220 230 240 250
LAPLLGELDE RERRIIDMRF GQEMTQAQIG AELGISQMHV SRLLSRMLGK

LRNGMLTQE
Length:259
Mass (Da):29,124
Last modified:November 1, 1996 - v1
Checksum:i162598B890AEFD3F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D17466 Genomic DNA. Translation: BAA04283.1.
PIRiS55033.

Similar proteinsi

Entry informationi

Entry nameiQ55358_STRGR
AccessioniPrimary (citable) accession number: Q55358
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)