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Protein

Putative RNA methyltransferase slr0064

Gene

slr0064

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Putative RNA methyltransferase slr0064 (EC:2.1.1.-)
Gene namesi
Ordered Locus Names:slr0064
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 384384Putative RNA methyltransferase slr0064PRO_0000140477Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ55156.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini53 – 164112THUMPPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the methyltransferase superfamily.Curated
Contains 1 THUMP domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiQ55156.
KOiK07444.
OMAiGFMYKAN.
OrthoDBiEOG6HJ238.
PhylomeDBiQ55156.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR000241. RNA_methylase_dom.
IPR029063. SAM-dependent_MTases.
IPR004114. THUMP_dom.
[Graphical view]
PfamiPF02926. THUMP. 1 hit.
PF01170. UPF0020. 1 hit.
[Graphical view]
SMARTiSM00981. THUMP. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.
PROSITEiPS00092. N6_MTASE. 1 hit.
PS51165. THUMP. 1 hit.
PS01261. UPF0020. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55156-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDTSAFSAT TRPYFATVAR GLEAIAAQEL TELGAEQVKP EFAGVAFIGD
60 70 80 90 100
RALLYRINLW SRLIYRVLMP MATVKAFNAQ DLYRSIKKID WDEYFSPEQT
110 120 130 140 150
LQINCTGKNP QLNHSHFTAL QVKNAIVDQQ RDRYQRRSSV DLEQPDIVIN
160 170 180 190 200
AHIHQNHCQL SLDSTGFSLH RRGYRPALGN APLKETLASA LLTMAGWTPE
210 220 230 240 250
LPLYDPLCGS GTFLLEAGLQ SLNIAPGKFQ PGFCFQQWPD FDQDLWHSLL
260 270 280 290 300
QTAKAGERDT LQAPLWGSDG DREVIQAAKS NAQQCQLGGK IHWQKLNFAD
310 320 330 340 350
IEPPAAEGVL ICNPPYGKRI GQEEALGDFY QQIGDVLKQR FRGWTAFVFS
360 370 380
GNKALTKRIG LRTSARFPVN NGGLPCTLLK YELY
Length:384
Mass (Da):43,003
Last modified:November 1, 1996 - v1
Checksum:i8117C44305BAB00D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10293.1.
PIRiS74375.

Genome annotation databases

EnsemblBacteriaiBAA10293; BAA10293; BAA10293.
KEGGisyn:slr0064.
PATRICi23842076. VBISynSp132158_2579.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10293.1.
PIRiS74375.

3D structure databases

ProteinModelPortaliQ55156.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10293; BAA10293; BAA10293.
KEGGisyn:slr0064.
PATRICi23842076. VBISynSp132158_2579.

Phylogenomic databases

InParanoidiQ55156.
KOiK07444.
OMAiGFMYKAN.
OrthoDBiEOG6HJ238.
PhylomeDBiQ55156.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR000241. RNA_methylase_dom.
IPR029063. SAM-dependent_MTases.
IPR004114. THUMP_dom.
[Graphical view]
PfamiPF02926. THUMP. 1 hit.
PF01170. UPF0020. 1 hit.
[Graphical view]
SMARTiSM00981. THUMP. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.
PROSITEiPS00092. N6_MTASE. 1 hit.
PS51165. THUMP. 1 hit.
PS01261. UPF0020. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY064_SYNY3
AccessioniPrimary (citable) accession number: Q55156
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.