Reviewed, UniProtKB/Swiss-Prot Q55147 (Y063_SYNY3)

Names and origin

Protein names

Recommended name:
    UPF0118 membrane protein sll0063

Gene names

Ordered Locus Names:

sll0063

Organism

Synechocystis sp. (strain PCC 6803) [Complete proteome] [HAMAP]

Taxonomic identifier

1148 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechocystis

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the UPF0118 (perM) family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Transmembrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cytochrome complex assembly Inferred from electronic annotation. Source: InterPro heme transport Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	heme transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 395	395	UPF0118 membrane protein sll0063		PRO_0000148321
Regions
	Transmembrane	24 – 44	21	Potential
	Transmembrane	50 – 70	21	Potential
	Transmembrane	91 – 111	21	Potential
	Transmembrane	180 – 200	21	Potential
	Transmembrane	245 – 265	21	Potential
	Transmembrane	269 – 289	21	Potential
	Transmembrane	295 – 315	21	Potential
	Transmembrane	328 – 348	21	Potential

Sequences

	Sequence		Length	Mass (Da)
	Q55147-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 808C8244B3675851	FASTA	395	43,113
	10 20 30 40 50 60 MTEPANNHPS PPPQNWLFKW WNSLNAITRL LVLVLGAPLM VLNARALSSI FGYFESLFVI 70 80 90 100 110 120 SLIASVIAFL LNYPVAWLEK QGAKRFVAAS FVFLTALIIF TALGVTLIPL ALSQAQQLVA 130 140 150 160 170 180 RLPDWLDSGQ KQLVLLDQKA EILGWPVNFD GLIPQINSRL AAELQNLAGS TLNLALSLTV 190 200 210 220 230 240 FTVVRLLDVL LTIILTFYLL LHTDDVWQSI IGWLPERFQK PFSDTLRRSF QNYFLGQLVS 250 260 270 280 290 300 ATCMALGLIS GFLLLKVPFG LLFGLTVGVM ALIPFGGSVG IVLVTFLVAL RDIGMALQLL 310 320 330 340 350 360 AVALVIQQIV ENGIAPRVLG SVTGLNPFWV LISLLTGARI GGLLGVIVAV PSAVMIKEAL 370 380 390 GAIRSMKPLV PAPDHNQDPL YFKNQEEVQP LPPRP

References

[1]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome." Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S. DNA Res. 2:153-166(1995) [PubMed: 8590279] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions." Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. DNA Res. 3:109-136(1996) [PubMed: 8905231] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	BA000022 Genomic DNA. Translation: BAA10283.1.
PIR	S74365.
RefSeq	NP_442213.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q55147.
Genome annotation databases
GeneID	952582.
GenomeReviews	Gene locus sll0063 in contig BA000022_GR.
KEGG	syn:sll0063.
NMPDR	fig|1148.1.peg.2314.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q55147.
OMA	LILSTCM
Enzyme and pathway databases
BioCyc	SSP1148:SLL0063-MON.
Family and domain databases
InterPro	IPR003544. Cyt_c_biogenesis_CcmB. IPR002549. UPF0118. [Graphical view]
PANTHER	PTHR21716. UPF0118. 1 hit.
Pfam	PF01594. UPF0118. 1 hit. [Graphical view]
PRINTS	PR01414. CCMBBIOGNSIS.
ProtoNet	Search...

Entry information

Entry name

Y063_SYNY3

Accession

Primary (citable) accession number: Q55147

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	November 1, 1996
Last modified:	November 24, 2009
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)