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Q55119

- EFP_SYNY3

UniProt

Q55119 - EFP_SYNY3

Protein

Elongation factor P

Gene

efp

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 98 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase By similarity.By similarity

    Pathwayi

    GO - Molecular functioni

    1. translation elongation factor activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. peptide biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    Elongation factor

    Keywords - Biological processi

    Protein biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00345.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor P
    Short name:
    EF-P
    Gene namesi
    Name:efp
    Ordered Locus Names:slr0434
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 187187Elongation factor PPRO_0000094354Add
    BLAST

    Proteomic databases

    PaxDbiQ55119.

    Interactioni

    Protein-protein interaction databases

    IntActiQ55119. 1 interaction.
    STRINGi1148.slr0434.

    Structurei

    3D structure databases

    ProteinModelPortaliQ55119.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the elongation factor P family.Curated

    Phylogenomic databases

    eggNOGiCOG0231.
    HOGENOMiHOG000010048.
    KOiK02356.
    OMAiPPHIGTG.
    OrthoDBiEOG6JQH6Q.
    PhylomeDBiQ55119.

    Family and domain databases

    Gene3Di2.30.30.30. 1 hit.
    2.40.50.140. 2 hits.
    HAMAPiMF_00141. EF_P.
    InterProiIPR015365. Elong-fact-P_C.
    IPR012340. NA-bd_OB-fold.
    IPR014722. Rib_L2_dom2.
    IPR020599. Transl_elong_fac_P/YeiP.
    IPR013185. Transl_elong_KOW-like.
    IPR001059. Transl_elong_P/YeiP_cen.
    IPR013852. Transl_elong_P/YeiP_CS.
    IPR011768. Transl_elongation_fac_P.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PfamiPF01132. EFP. 1 hit.
    PF08207. EFP_N. 1 hit.
    PF09285. Elong-fact-P_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005901. EF-P. 1 hit.
    SMARTiSM00841. Elong-fact-P_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50104. SSF50104. 1 hit.
    SSF50249. SSF50249. 2 hits.
    TIGRFAMsiTIGR00038. efp. 1 hit.
    PROSITEiPS01275. EFP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q55119-1 [UniParc]FASTAAdd to Basket

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    MISSNDFRTG TSIVMDGAVW KVVEFLHVKP GKGSAFVRTK LKSVQTGNVV    50
    EKTFRAGETV PQANIEKSVM QHTYKDGDQY VFMDMETFEE VSIAPDTLGD 100
    KAKFIKEEME VSVVTWDGTI LDVELPTSVV LEIVETDPGV KGDTATGGTK 150
    PAILETGAQV MVPLFIAQGE RIKVDTRDGS YLGRDNA 187
    Length:187
    Mass (Da):20,406
    Last modified:November 1, 1997 - v1
    Checksum:iB7D900A822B94938
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10251.1.
    PIRiS74333.
    RefSeqiNP_442181.1. NC_000911.1.
    YP_005652240.1. NC_017277.1.
    YP_007452057.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10251; BAA10251; BAA10251.
    GeneIDi952603.
    KEGGisyn:slr0434.
    syy:SYNGTS_2287.
    syz:MYO_123110.
    PATRICi23841984. VBISynSp132158_2534.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10251.1 .
    PIRi S74333.
    RefSeqi NP_442181.1. NC_000911.1.
    YP_005652240.1. NC_017277.1.
    YP_007452057.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali Q55119.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q55119. 1 interaction.
    STRINGi 1148.slr0434.

    Proteomic databases

    PaxDbi Q55119.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10251 ; BAA10251 ; BAA10251 .
    GeneIDi 952603.
    KEGGi syn:slr0434.
    syy:SYNGTS_2287.
    syz:MYO_123110.
    PATRICi 23841984. VBISynSp132158_2534.

    Phylogenomic databases

    eggNOGi COG0231.
    HOGENOMi HOG000010048.
    KOi K02356.
    OMAi PPHIGTG.
    OrthoDBi EOG6JQH6Q.
    PhylomeDBi Q55119.

    Enzyme and pathway databases

    UniPathwayi UPA00345 .

    Family and domain databases

    Gene3Di 2.30.30.30. 1 hit.
    2.40.50.140. 2 hits.
    HAMAPi MF_00141. EF_P.
    InterProi IPR015365. Elong-fact-P_C.
    IPR012340. NA-bd_OB-fold.
    IPR014722. Rib_L2_dom2.
    IPR020599. Transl_elong_fac_P/YeiP.
    IPR013185. Transl_elong_KOW-like.
    IPR001059. Transl_elong_P/YeiP_cen.
    IPR013852. Transl_elong_P/YeiP_CS.
    IPR011768. Transl_elongation_fac_P.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    Pfami PF01132. EFP. 1 hit.
    PF08207. EFP_N. 1 hit.
    PF09285. Elong-fact-P_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005901. EF-P. 1 hit.
    SMARTi SM00841. Elong-fact-P_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50104. SSF50104. 1 hit.
    SSF50249. SSF50249. 2 hits.
    TIGRFAMsi TIGR00038. efp. 1 hit.
    PROSITEi PS01275. EFP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
      Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
      DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27184 / PCC 6803 / N-1.
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiEFP_SYNY3
    AccessioniPrimary (citable) accession number: Q55119
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 98 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3