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Q55119

- EFP_SYNY3

UniProt

Q55119 - EFP_SYNY3

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Protein

Elongation factor P

Gene

efp

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity).By similarity

Pathwayi

GO - Molecular functioni

  1. translation elongation factor activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. peptide biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Elongation factor

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00345.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor P
Short name:
EF-P
Gene namesi
Name:efp
Ordered Locus Names:slr0434
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 187187Elongation factor PPRO_0000094354Add
BLAST

Proteomic databases

PaxDbiQ55119.

Interactioni

Protein-protein interaction databases

IntActiQ55119. 1 interaction.
STRINGi1148.slr0434.

Structurei

3D structure databases

ProteinModelPortaliQ55119.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the elongation factor P family.Curated

Phylogenomic databases

eggNOGiCOG0231.
HOGENOMiHOG000010048.
InParanoidiQ55119.
KOiK02356.
OMAiPPHIGTG.
OrthoDBiEOG6JQH6Q.
PhylomeDBiQ55119.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
2.40.50.140. 2 hits.
HAMAPiMF_00141. EF_P.
InterProiIPR015365. Elong-fact-P_C.
IPR012340. NA-bd_OB-fold.
IPR014722. Rib_L2_dom2.
IPR020599. Transl_elong_fac_P/YeiP.
IPR013185. Transl_elong_KOW-like.
IPR001059. Transl_elong_P/YeiP_cen.
IPR013852. Transl_elong_P/YeiP_CS.
IPR011768. Transl_elongation_fac_P.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF01132. EFP. 1 hit.
PF08207. EFP_N. 1 hit.
PF09285. Elong-fact-P_C. 1 hit.
[Graphical view]
PIRSFiPIRSF005901. EF-P. 1 hit.
SMARTiSM00841. Elong-fact-P_C. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
SSF50249. SSF50249. 2 hits.
TIGRFAMsiTIGR00038. efp. 1 hit.
PROSITEiPS01275. EFP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55119-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MISSNDFRTG TSIVMDGAVW KVVEFLHVKP GKGSAFVRTK LKSVQTGNVV
60 70 80 90 100
EKTFRAGETV PQANIEKSVM QHTYKDGDQY VFMDMETFEE VSIAPDTLGD
110 120 130 140 150
KAKFIKEEME VSVVTWDGTI LDVELPTSVV LEIVETDPGV KGDTATGGTK
160 170 180
PAILETGAQV MVPLFIAQGE RIKVDTRDGS YLGRDNA
Length:187
Mass (Da):20,406
Last modified:November 1, 1997 - v1
Checksum:iB7D900A822B94938
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10251.1.
PIRiS74333.
RefSeqiNP_442181.1. NC_000911.1.
YP_005652240.1. NC_017277.1.
YP_007452057.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10251; BAA10251; BAA10251.
GeneIDi952603.
KEGGisyn:slr0434.
syy:SYNGTS_2287.
syz:MYO_123110.
PATRICi23841984. VBISynSp132158_2534.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10251.1 .
PIRi S74333.
RefSeqi NP_442181.1. NC_000911.1.
YP_005652240.1. NC_017277.1.
YP_007452057.1. NC_020286.1.

3D structure databases

ProteinModelPortali Q55119.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q55119. 1 interaction.
STRINGi 1148.slr0434.

Proteomic databases

PaxDbi Q55119.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10251 ; BAA10251 ; BAA10251 .
GeneIDi 952603.
KEGGi syn:slr0434.
syy:SYNGTS_2287.
syz:MYO_123110.
PATRICi 23841984. VBISynSp132158_2534.

Phylogenomic databases

eggNOGi COG0231.
HOGENOMi HOG000010048.
InParanoidi Q55119.
KOi K02356.
OMAi PPHIGTG.
OrthoDBi EOG6JQH6Q.
PhylomeDBi Q55119.

Enzyme and pathway databases

UniPathwayi UPA00345 .

Family and domain databases

Gene3Di 2.30.30.30. 1 hit.
2.40.50.140. 2 hits.
HAMAPi MF_00141. EF_P.
InterProi IPR015365. Elong-fact-P_C.
IPR012340. NA-bd_OB-fold.
IPR014722. Rib_L2_dom2.
IPR020599. Transl_elong_fac_P/YeiP.
IPR013185. Transl_elong_KOW-like.
IPR001059. Transl_elong_P/YeiP_cen.
IPR013852. Transl_elong_P/YeiP_CS.
IPR011768. Transl_elongation_fac_P.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
Pfami PF01132. EFP. 1 hit.
PF08207. EFP_N. 1 hit.
PF09285. Elong-fact-P_C. 1 hit.
[Graphical view ]
PIRSFi PIRSF005901. EF-P. 1 hit.
SMARTi SM00841. Elong-fact-P_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50104. SSF50104. 1 hit.
SSF50249. SSF50249. 2 hits.
TIGRFAMsi TIGR00038. efp. 1 hit.
PROSITEi PS01275. EFP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiEFP_SYNY3
AccessioniPrimary (citable) accession number: Q55119
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 29, 2014
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3