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Q55118

- PPI3_SYNY3

UniProt

Q55118 - PPI3_SYNY3

Protein

Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408

Gene

sll0408

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 95 (01 Oct 2014)
      Sequence version 2 (14 Oct 2008)
      Previous versions | rss
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    Functioni

    PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII By similarity.By similarity

    Catalytic activityi

    Peptidylproline (omega=180) = peptidylproline (omega=0).

    GO - Molecular functioni

    1. peptidyl-prolyl cis-trans isomerase activity Source: UniProtKB-KW

    GO - Biological processi

    1. protein folding Source: UniProtKB-KW

    Keywords - Molecular functioni

    Isomerase, Rotamase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408 (EC:5.2.1.8)
    Short name:
    Putative thylakoid lumen PPIase
    Alternative name(s):
    Putative thylakoid lumen rotamase
    Gene namesi
    Ordered Locus Names:sll0408
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cellular thylakoid lumen 1 Publication

    GO - Cellular componenti

    1. thylakoid lumen Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Thylakoid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3333Sequence AnalysisAdd
    BLAST
    Chaini34 – 379346Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408PRO_0000352737Add
    BLAST

    Proteomic databases

    PaxDbiQ55118.

    Interactioni

    Protein-protein interaction databases

    IntActiQ55118. 3 interactions.
    STRINGi1148.sll0408.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini190 – 378189PPIase cyclophilin-typePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 PPIase cyclophilin-type domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG0652.
    KOiK01802.
    OMAiNVEDCVF.
    OrthoDBiEOG6CVV84.
    PhylomeDBiQ55118.

    Family and domain databases

    Gene3Di1.20.120.290. 1 hit.
    2.40.100.10. 1 hit.
    InterProiIPR029000. Cyclophilin-like_dom.
    IPR002130. Cyclophilin-type_PPIase_dom.
    IPR023222. PsbQ-like_domain.
    [Graphical view]
    PfamiPF00160. Pro_isomerase. 1 hit.
    [Graphical view]
    SUPFAMiSSF101112. SSF101112. 1 hit.
    SSF50891. SSF50891. 2 hits.
    PROSITEiPS50072. CSA_PPIASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q55118-1 [UniParc]FASTAAdd to Basket

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    MQIIKTPLGI ITRRGLQLSL LSLLLTMLSL TWAMPGWSLP LNQPMLLGAL    50
    AQGNAITDPN AILRYALPID NPEVRRLQDS LEDISNHIRA KRWPAIKKDV 100
    RAANLTITLK EDKILAGVPA DRQPEAETLL GSIKTDLTAL TEAVEAKDKE 150
    QVISFRKSAL TAIGDLEALM VTDFPFAIPE EFANLPQLKG RATVEMTTNK 200
    GPLTIVVDGY SAPINAGNFV DLVQRKFYDG LPFIRSEDFF VTQAGDPPGP 250
    EAGFIDPQTK EYRAIPLEIL VKGEEGPIYG MTLEDAGMYL PELALPFNAY 300
    GAIALARPET EPNGGSSQFF FFKFDTELTP PGFNLMDGRY SVFGYVVDGK 350
    ETLEQLSEGD KIVSAKVISG ADNLVNGNS 379
    Length:379
    Mass (Da):41,386
    Last modified:October 14, 2008 - v2
    Checksum:i0C0E52879ECE5B58
    GO

    Sequence cautioni

    The sequence BAA10250.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10250.1. Different initiation.
    PIRiS74332.
    RefSeqiNP_442180.1. NC_000911.1.
    YP_005652239.1. NC_017277.1.
    YP_007452056.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10250; BAA10250; BAA10250.
    GeneIDi952617.
    KEGGisyn:sll0408.
    syy:SYNGTS_2286.
    syz:MYO_123100.
    PATRICi23841982. VBISynSp132158_2533.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10250.1 . Different initiation.
    PIRi S74332.
    RefSeqi NP_442180.1. NC_000911.1.
    YP_005652239.1. NC_017277.1.
    YP_007452056.1. NC_020286.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q55118. 3 interactions.
    STRINGi 1148.sll0408.

    Proteomic databases

    PaxDbi Q55118.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10250 ; BAA10250 ; BAA10250 .
    GeneIDi 952617.
    KEGGi syn:sll0408.
    syy:SYNGTS_2286.
    syz:MYO_123100.
    PATRICi 23841982. VBISynSp132158_2533.

    Phylogenomic databases

    eggNOGi COG0652.
    KOi K01802.
    OMAi NVEDCVF.
    OrthoDBi EOG6CVV84.
    PhylomeDBi Q55118.

    Family and domain databases

    Gene3Di 1.20.120.290. 1 hit.
    2.40.100.10. 1 hit.
    InterProi IPR029000. Cyclophilin-like_dom.
    IPR002130. Cyclophilin-type_PPIase_dom.
    IPR023222. PsbQ-like_domain.
    [Graphical view ]
    Pfami PF00160. Pro_isomerase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101112. SSF101112. 1 hit.
    SSF50891. SSF50891. 2 hits.
    PROSITEi PS50072. CSA_PPIASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.
    2. "Proteomic studies of the thylakoid membrane of Synechocystis sp. PCC 6803."
      Srivastava R., Pisareva T., Norling B.
      Proteomics 5:4905-4916(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: SUBCELLULAR LOCATION IN THYLAKOID.

    Entry informationi

    Entry nameiPPI3_SYNY3
    AccessioniPrimary (citable) accession number: Q55118
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 14, 2008
    Last sequence update: October 14, 2008
    Last modified: October 1, 2014
    This is version 95 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3