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Protein
Submitted name:

ClpC

Gene

clpC

Organism
Synechococcus sp.
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ChaperoneUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ClpCImported
Gene namesi
Name:clpCImported
OrganismiSynechococcus sp.Imported
Taxonomic identifieri1131 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Structurei

3D structure databases

ProteinModelPortaliQ55023.
SMRiQ55023. Positions 177-366.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini431 – 46636UVRInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ClpA/ClpB family.UniRule annotation

Family and domain databases

Gene3Di1.10.1780.10. 1 hit.
3.40.50.300. 3 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR019489. Clp_ATPase_C.
IPR004176. Clp_N.
IPR001270. ClpA/B.
IPR018368. ClpA/B_CS1.
IPR028299. ClpA/B_CS2.
IPR027417. P-loop_NTPase.
IPR001943. UVR_dom.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF07724. AAA_2. 1 hit.
PF02861. Clp_N. 2 hits.
PF10431. ClpB_D2-small. 1 hit.
PF02151. UVR. 1 hit.
[Graphical view]
PRINTSiPR00300. CLPPROTEASEA.
SMARTiSM00382. AAA. 2 hits.
SM01086. ClpB_D2-small. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF81923. SSF81923. 1 hit.
PROSITEiPS00870. CLPAB_1. 1 hit.
PS00871. CLPAB_2. 1 hit.
PS50151. UVR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55023-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVLESAYRH AGREAMFERF TEKAIKVIML AQEEARRLGH NFVGTEQILL
60 70 80 90 100
GLIGEGTGVA AKVLKSMGVN LKDARIEVEK IIGRGSGFVA VEIPFTPRAK
110 120 130 140 150
RVLELSLEEA RQLGHNYIGT EHLLLGLIRE GEGVAARVLE NLGVDLSKVR
160 170 180 190 200
TQVIRMLGET AEVSTGGGQG RTKTPTLDEF GSNLTQQAAD GKLDPVVGRQ
210 220 230 240 250
KEIERVIQIL GRRTKNNPVL IGEPGVGKTA IAEGLAQRIA TGDIPDILED
260 270 280 290 300
KRVVTLDIGL LVAGTKYRGE FEERLKKIMD EIRSAGNVIL VIDEVHTLIG
310 320 330 340 350
AGAAEGAIDA ANILKPALAR GELQCIGATT LDEYRKHIER DAALERRFQP
360 370 380 390 400
VMLGEPSVDD TIEILRGLRE RYEQHHKLKI ADEALEAAAK LADRYISDLF
410 420 430 440 450
LPDKAIDLID EAGSRVRLMN SQLAPAAKEL DKELRQVLKD KDDAVRSQDF
460 470 480 490 500
DKAGELRDRE MEIKTQIRSI AQSKKADGTS STDDSPIVTE EDIAHIVASW
510 520 530 540 550
TGVPVNKLTE SESTKLLNME ETLHSRLIGQ DEAVKAVSRA IRRARVGLKN
560 570 580 590 600
PNRPIASFIF SGPTGVGKTE LTKALAAYFF GSEEAMIRLD MSEYMERHTV
610 620 630 640 650
SKLIGSPPGY VGYNEGGQLT EAVRRRPYTV VLLDEIEKAH PDVFNLLLQL
660 670 680 690 700
LEDGRLTDAK GRTVDFKNTL IILTSNIGSK VIEKGGGGLG FEFSGVDEAE
710 720 730 740 750
NQYNRIRSLV NEELKQYFRP EFLNRLDEII VFRQLNKEEV KEIADIMLRE
760 770 780 790 800
VFGRMLEKGI SLSVTEKFKD RLVEEGYNPS YGARPLRRAI MRLLEDSLAE
810 820 830
EFLSGKLREG DTAVVDIGEE GKVQVLAQEK RELLPQAVD
Length:839
Mass (Da):92,884
Last modified:November 1, 1996 - v1
Checksum:iB723D929E690731C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U16134 Genomic DNA. Translation: AAB67745.1.
PIRiS71553.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U16134 Genomic DNA. Translation: AAB67745.1.
PIRiS71553.

3D structure databases

ProteinModelPortaliQ55023.
SMRiQ55023. Positions 177-366.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.1780.10. 1 hit.
3.40.50.300. 3 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR019489. Clp_ATPase_C.
IPR004176. Clp_N.
IPR001270. ClpA/B.
IPR018368. ClpA/B_CS1.
IPR028299. ClpA/B_CS2.
IPR027417. P-loop_NTPase.
IPR001943. UVR_dom.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF07724. AAA_2. 1 hit.
PF02861. Clp_N. 2 hits.
PF10431. ClpB_D2-small. 1 hit.
PF02151. UVR. 1 hit.
[Graphical view]
PRINTSiPR00300. CLPPROTEASEA.
SMARTiSM00382. AAA. 2 hits.
SM01086. ClpB_D2-small. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF81923. SSF81923. 1 hit.
PROSITEiPS00870. CLPAB_1. 1 hit.
PS00871. CLPAB_2. 1 hit.
PS50151. UVR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The cyanobacterium Synechococcus sp. PCC 7942 possesses a close homologue to the chloroplast ClpC protein of higher plants."
    Clarke A.K., Eriksson M.J.
    Plant Mol. Biol. 31:721-730(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PCC 7942Imported.

Entry informationi

Entry nameiQ55023_SYNSP
AccessioniPrimary (citable) accession number: Q55023
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 16, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.