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Q55004

- RL34_SYNY3

UniProt

Q55004 - RL34_SYNY3

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Protein

50S ribosomal protein L34

Gene

rpmH

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L34
Gene namesi
Name:rpmH
Synonyms:rpl34
Ordered Locus Names:smr0011
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 454550S ribosomal protein L34PRO_0000187486Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi1148.smr0011.

Structurei

3D structure databases

ProteinModelPortaliQ55004.
SMRiQ55004. Positions 3-45.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L34P family.Curated

Phylogenomic databases

eggNOGiCOG0230.
InParanoidiQ55004.
KOiK02914.
OrthoDBiEOG6DZF71.
PhylomeDBiQ55004.

Family and domain databases

HAMAPiMF_00391. Ribosomal_L34.
InterProiIPR000271. Ribosomal_L34.
[Graphical view]
PANTHERiPTHR14503. PTHR14503. 1 hit.
PfamiPF00468. Ribosomal_L34. 1 hit.
[Graphical view]
ProDomiPD003101. Ribosomal_L34. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR01030. rpmH_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q55004-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40
MTQRTLGGTN RKQKRTSGFR ARMRTHNGRK VIQARRSKGR HRLAV
Length:45
Mass (Da):5,261
Last modified:November 1, 1996 - v1
Checksum:i33443A70CE7FB994
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X81989 Genomic DNA. Translation: CAA57515.1.
BA000022 Genomic DNA. Translation: BAA18241.1.
PIRiS75680.
RefSeqiNP_441561.1. NC_000911.1.
YP_005651619.1. NC_017277.1.
YP_007451443.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA18241; BAA18241; BAA18241.
GeneIDi955006.
KEGGisyn:smr0011.
syy:SYNGTS_1666.
syz:MYO_116820.
PATRICi23840551. VBISynSp132158_1832.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X81989 Genomic DNA. Translation: CAA57515.1 .
BA000022 Genomic DNA. Translation: BAA18241.1 .
PIRi S75680.
RefSeqi NP_441561.1. NC_000911.1.
YP_005651619.1. NC_017277.1.
YP_007451443.1. NC_020286.1.

3D structure databases

ProteinModelPortali Q55004.
SMRi Q55004. Positions 3-45.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 1148.smr0011.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA18241 ; BAA18241 ; BAA18241 .
GeneIDi 955006.
KEGGi syn:smr0011.
syy:SYNGTS_1666.
syz:MYO_116820.
PATRICi 23840551. VBISynSp132158_1832.

Phylogenomic databases

eggNOGi COG0230.
InParanoidi Q55004.
KOi K02914.
OrthoDBi EOG6DZF71.
PhylomeDBi Q55004.

Family and domain databases

HAMAPi MF_00391. Ribosomal_L34.
InterProi IPR000271. Ribosomal_L34.
[Graphical view ]
PANTHERi PTHR14503. PTHR14503. 1 hit.
Pfami PF00468. Ribosomal_L34. 1 hit.
[Graphical view ]
ProDomi PD003101. Ribosomal_L34. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
TIGRFAMsi TIGR01030. rpmH_bact. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning, purification and characterization of the protein subunit of ribonuclease P from the cyanobacterium Synechocystis sp. PCC 6803."
    Pascual A., Vioque A.
    Eur. J. Biochem. 241:17-24(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiRL34_SYNY3
AccessioniPrimary (citable) accession number: Q55004
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3