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Q55004

- RL34_SYNY3

UniProt

Q55004 - RL34_SYNY3

Protein

50S ribosomal protein L34

Gene

rpmH

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L34
    Gene namesi
    Name:rpmH
    Synonyms:rpl34
    Ordered Locus Names:smr0011
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 454550S ribosomal protein L34PRO_0000187486Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi1148.smr0011.

    Structurei

    3D structure databases

    ProteinModelPortaliQ55004.
    SMRiQ55004. Positions 3-45.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L34P family.Curated

    Phylogenomic databases

    eggNOGiCOG0230.
    KOiK02914.
    OrthoDBiEOG6DZF71.
    PhylomeDBiQ55004.

    Family and domain databases

    HAMAPiMF_00391. Ribosomal_L34.
    InterProiIPR000271. Ribosomal_L34.
    [Graphical view]
    PANTHERiPTHR14503. PTHR14503. 1 hit.
    PfamiPF00468. Ribosomal_L34. 1 hit.
    [Graphical view]
    ProDomiPD003101. Ribosomal_L34. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR01030. rpmH_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q55004-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTQRTLGGTN RKQKRTSGFR ARMRTHNGRK VIQARRSKGR HRLAV        45
    Length:45
    Mass (Da):5,261
    Last modified:November 1, 1996 - v1
    Checksum:i33443A70CE7FB994
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X81989 Genomic DNA. Translation: CAA57515.1.
    BA000022 Genomic DNA. Translation: BAA18241.1.
    PIRiS75680.
    RefSeqiNP_441561.1. NC_000911.1.
    YP_005651619.1. NC_017277.1.
    YP_007451443.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA18241; BAA18241; BAA18241.
    GeneIDi955006.
    KEGGisyn:smr0011.
    syy:SYNGTS_1666.
    syz:MYO_116820.
    PATRICi23840551. VBISynSp132158_1832.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X81989 Genomic DNA. Translation: CAA57515.1 .
    BA000022 Genomic DNA. Translation: BAA18241.1 .
    PIRi S75680.
    RefSeqi NP_441561.1. NC_000911.1.
    YP_005651619.1. NC_017277.1.
    YP_007451443.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali Q55004.
    SMRi Q55004. Positions 3-45.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 1148.smr0011.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA18241 ; BAA18241 ; BAA18241 .
    GeneIDi 955006.
    KEGGi syn:smr0011.
    syy:SYNGTS_1666.
    syz:MYO_116820.
    PATRICi 23840551. VBISynSp132158_1832.

    Phylogenomic databases

    eggNOGi COG0230.
    KOi K02914.
    OrthoDBi EOG6DZF71.
    PhylomeDBi Q55004.

    Family and domain databases

    HAMAPi MF_00391. Ribosomal_L34.
    InterProi IPR000271. Ribosomal_L34.
    [Graphical view ]
    PANTHERi PTHR14503. PTHR14503. 1 hit.
    Pfami PF00468. Ribosomal_L34. 1 hit.
    [Graphical view ]
    ProDomi PD003101. Ribosomal_L34. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR01030. rpmH_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Cloning, purification and characterization of the protein subunit of ribonuclease P from the cyanobacterium Synechocystis sp. PCC 6803."
      Pascual A., Vioque A.
      Eur. J. Biochem. 241:17-24(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiRL34_SYNY3
    AccessioniPrimary (citable) accession number: Q55004
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3