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Q55004 (RL34_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L34
Gene names
Name:rpmH
Synonyms:rpl34
Ordered Locus Names:smr0011
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length45 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L34P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 454550S ribosomal protein L34 HAMAP-Rule MF_00391
PRO_0000187486

Sequences

Sequence LengthMass (Da)Tools
Q55004 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 33443A70CE7FB994

FASTA455,261
        10         20         30         40 
MTQRTLGGTN RKQKRTSGFR ARMRTHNGRK VIQARRSKGR HRLAV 

« Hide

References

« Hide 'large scale' references
[1]"Cloning, purification and characterization of the protein subunit of ribonuclease P from the cyanobacterium Synechocystis sp. PCC 6803."
Pascual A., Vioque A.
Eur. J. Biochem. 241:17-24(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X81989 Genomic DNA. Translation: CAA57515.1.
BA000022 Genomic DNA. Translation: BAA18241.1.
PIRS75680.
RefSeqNP_441561.1. NC_000911.1.
YP_005651619.1. NC_017277.1.
YP_007451443.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55004.
SMRQ55004. Positions 3-45.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.smr0011.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18241; BAA18241; BAA18241.
GeneID955006.
KEGGsyn:smr0011.
syy:SYNGTS_1666.
syz:MYO_116820.
PATRIC23840551. VBISynSp132158_1832.

Phylogenomic databases

eggNOGCOG0230.
KOK02914.
OrthoDBEOG6DZF71.
PhylomeDBQ55004.

Family and domain databases

HAMAPMF_00391. Ribosomal_L34.
InterProIPR000271. Ribosomal_L34.
[Graphical view]
PANTHERPTHR14503. PTHR14503. 1 hit.
PfamPF00468. Ribosomal_L34. 1 hit.
[Graphical view]
ProDomPD003101. Ribosomal_L34. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR01030. rpmH_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL34_SYNY3
AccessionPrimary (citable) accession number: Q55004
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries