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Q54TS5

- Q54TS5_DICDI

UniProt

Q54TS5 - Q54TS5_DICDI

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Protein
Submitted name: Putative uncharacterized protein amyA
Gene
amyA, DDB_G0281547
Organism
Dictyostelium discoideum (Slime mold)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein amyAImported
Gene namesi
Name:amyAImported
ORF Names:DDB_G0281547Imported
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
ProteomesiUP000002195: Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0281547. amyA.

PTM / Processingi

Proteomic databases

PRIDEiQ54TS5.

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB_0214924.

Structurei

3D structure databases

ProteinModelPortaliQ54TS5.

Family & Domainsi

Phylogenomic databases

InParanoidiQ54TS5.
KOiK01176.
OMAiSNDPANR.
PhylomeDBiQ54TS5.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q54TS5-1 [UniParc]FASTAAdd to Basket

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MNKTISVVIF ALIAIVSVTL AATPDQWGSR TIYQLLTDRF SQTVNSSQPC    50
GNLQGYCGGT FQGVEAHLDY IQGMGFDAIW ISPVVTNTPG GYHGYWQQDI 100
YTVNEYFGTE NDLLNMIKAC HERGIWVMLD VVANHVGPVN YDYSTIVPFD 150
SVEHYHNCTT CPQYCTIDDF TNYPQVEECR LSGLPDLDQD NQFVRTTLQA 200
WIKNMTEFYG FDGIRIDTVP EVKADFWREY NDAAGVYAVG EVYNGNLTYV 250
ASYQGPVDGV LSYPMFFTLR SVFAQQQSMN QIQSTFQSYQ QLFSNMSLLG 300
TFIDNHDQVR FLNEQSDIEL YKNAITYVLM AQGIPIIYYG TEQGFNGASD 350
PNNREPLWTT SFNTASPLYQ FIQTVNTFRA NITEDLTIAQ VQRYSDNGFY 400
AFTRGNAFVA LTNGGSNEVQ TSRNITYHPY LEGTTLCNIF YPTEDCIKVA 450
GGAFTVYLDH GESKIYYPMN 470
Length:470
Mass (Da):53,153
Last modified:May 24, 2005 - v1
Checksum:iBAA2320DD5FE4C33
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAFI02000042 Genomic DNA. Translation: EAL66535.1.
RefSeqiXP_640516.1. XM_635424.1.

Genome annotation databases

EnsemblProtistsiDDB0214924; DDB0214924; DDB_G0281547.
GeneIDi8623126.
KEGGiddi:DDB_G0281547.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAFI02000042 Genomic DNA. Translation: EAL66535.1 .
RefSeqi XP_640516.1. XM_635424.1.

3D structure databases

ProteinModelPortali Q54TS5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 44689.DDB_0214924.

Proteomic databases

PRIDEi Q54TS5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi DDB0214924 ; DDB0214924 ; DDB_G0281547 .
GeneIDi 8623126.
KEGGi ddi:DDB_G0281547.

Organism-specific databases

dictyBasei DDB_G0281547. amyA.

Phylogenomic databases

InParanoidi Q54TS5.
KOi K01176.
OMAi SNDPANR.
PhylomeDBi Q54TS5.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of the social amoeba Dictyostelium discoideum."
    The Dictyostelium discoideum Sequencing Consortium
    Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
    , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
    Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AX4.

Entry informationi

Entry nameiQ54TS5_DICDI
AccessioniPrimary (citable) accession number: Q54TS5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: September 3, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3