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Protein
Submitted name:

Putative alpha-amylase

Gene

amyA

Organism
Dictyostelium discoideum (Slime mold)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative alpha-amylaseImported
Gene namesi
Name:amyAImported
ORF Names:DDB0214924Imported
OrganismiDictyostelium discoideum (Slime mold)Imported
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
ProteomesiUP000002195 Componenti: Chromosome 3

Organism-specific databases

dictyBaseiDDB_G0281547. amyA.

PTM / Processingi

Proteomic databases

PRIDEiQ54TS5.

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB_0214924.

Structurei

3D structure databases

ProteinModelPortaliQ54TS5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiQ54TS5.
KOiK01176.
OMAiTIYFALT.
PhylomeDBiQ54TS5.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q54TS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKTISVVIF ALIAIVSVTL AATPDQWGSR TIYQLLTDRF SQTVNSSQPC
60 70 80 90 100
GNLQGYCGGT FQGVEAHLDY IQGMGFDAIW ISPVVTNTPG GYHGYWQQDI
110 120 130 140 150
YTVNEYFGTE NDLLNMIKAC HERGIWVMLD VVANHVGPVN YDYSTIVPFD
160 170 180 190 200
SVEHYHNCTT CPQYCTIDDF TNYPQVEECR LSGLPDLDQD NQFVRTTLQA
210 220 230 240 250
WIKNMTEFYG FDGIRIDTVP EVKADFWREY NDAAGVYAVG EVYNGNLTYV
260 270 280 290 300
ASYQGPVDGV LSYPMFFTLR SVFAQQQSMN QIQSTFQSYQ QLFSNMSLLG
310 320 330 340 350
TFIDNHDQVR FLNEQSDIEL YKNAITYVLM AQGIPIIYYG TEQGFNGASD
360 370 380 390 400
PNNREPLWTT SFNTASPLYQ FIQTVNTFRA NITEDLTIAQ VQRYSDNGFY
410 420 430 440 450
AFTRGNAFVA LTNGGSNEVQ TSRNITYHPY LEGTTLCNIF YPTEDCIKVA
460 470
GGAFTVYLDH GESKIYYPMN
Length:470
Mass (Da):53,153
Last modified:May 24, 2005 - v1
Checksum:iBAA2320DD5FE4C33
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI01000075 Genomic DNA. Translation: EAL66535.1.
RefSeqiXP_640516.1. XM_635424.1.

Genome annotation databases

EnsemblProtistsiDDB0214924; DDB0214924; DDB_G0281547.
GeneIDi8623126.
KEGGiddi:DDB_G0281547.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI01000075 Genomic DNA. Translation: EAL66535.1.
RefSeqiXP_640516.1. XM_635424.1.

3D structure databases

ProteinModelPortaliQ54TS5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi44689.DDB_0214924.

Proteomic databases

PRIDEiQ54TS5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiDDB0214924; DDB0214924; DDB_G0281547.
GeneIDi8623126.
KEGGiddi:DDB_G0281547.

Organism-specific databases

dictyBaseiDDB_G0281547. amyA.

Phylogenomic databases

InParanoidiQ54TS5.
KOiK01176.
OMAiTIYFALT.
PhylomeDBiQ54TS5.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome of the social amoeba Dictyostelium discoideum."
    The Dictyostelium discoideum Sequencing Consortium
    Eichinger L., Pachebat J.A., Glockner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
    , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R., Loomis W.F., Platzer M., Kay R.R., Williams J., Dear P.H., Noegel A.A., Barrell B., Kuspa A.
    Nature 435:43-57(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AX4Imported.

Entry informationi

Entry nameiQ54TS5_DICDI
AccessioniPrimary (citable) accession number: Q54TS5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: March 4, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.