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Q54TS5

- Q54TS5_DICDI

UniProt

Q54TS5 - Q54TS5_DICDI

Protein
Submitted name:

Putative uncharacterized protein amyA

Gene

amyA

Organism
Dictyostelium discoideum (Slime mold)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (24 May 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein amyAImported
    Gene namesi
    Name:amyAImported
    ORF Names:DDB_G0281547Imported
    OrganismiDictyostelium discoideum (Slime mold)Imported
    Taxonomic identifieri44689 [NCBI]
    Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
    ProteomesiUP000002195: Unassembled WGS sequence

    Organism-specific databases

    dictyBaseiDDB_G0281547. amyA.

    PTM / Processingi

    Proteomic databases

    PRIDEiQ54TS5.

    Interactioni

    Protein-protein interaction databases

    STRINGi44689.DDB_0214924.

    Structurei

    3D structure databases

    ProteinModelPortaliQ54TS5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    InParanoidiQ54TS5.
    KOiK01176.
    OMAiSNDPANR.
    PhylomeDBiQ54TS5.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q54TS5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNKTISVVIF ALIAIVSVTL AATPDQWGSR TIYQLLTDRF SQTVNSSQPC    50
    GNLQGYCGGT FQGVEAHLDY IQGMGFDAIW ISPVVTNTPG GYHGYWQQDI 100
    YTVNEYFGTE NDLLNMIKAC HERGIWVMLD VVANHVGPVN YDYSTIVPFD 150
    SVEHYHNCTT CPQYCTIDDF TNYPQVEECR LSGLPDLDQD NQFVRTTLQA 200
    WIKNMTEFYG FDGIRIDTVP EVKADFWREY NDAAGVYAVG EVYNGNLTYV 250
    ASYQGPVDGV LSYPMFFTLR SVFAQQQSMN QIQSTFQSYQ QLFSNMSLLG 300
    TFIDNHDQVR FLNEQSDIEL YKNAITYVLM AQGIPIIYYG TEQGFNGASD 350
    PNNREPLWTT SFNTASPLYQ FIQTVNTFRA NITEDLTIAQ VQRYSDNGFY 400
    AFTRGNAFVA LTNGGSNEVQ TSRNITYHPY LEGTTLCNIF YPTEDCIKVA 450
    GGAFTVYLDH GESKIYYPMN 470
    Length:470
    Mass (Da):53,153
    Last modified:May 24, 2005 - v1
    Checksum:iBAA2320DD5FE4C33
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000042 Genomic DNA. Translation: EAL66535.1.
    RefSeqiXP_640516.1. XM_635424.1.

    Genome annotation databases

    EnsemblProtistsiDDB0214924; DDB0214924; DDB_G0281547.
    GeneIDi8623126.
    KEGGiddi:DDB_G0281547.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000042 Genomic DNA. Translation: EAL66535.1 .
    RefSeqi XP_640516.1. XM_635424.1.

    3D structure databases

    ProteinModelPortali Q54TS5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 44689.DDB_0214924.

    Proteomic databases

    PRIDEi Q54TS5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi DDB0214924 ; DDB0214924 ; DDB_G0281547 .
    GeneIDi 8623126.
    KEGGi ddi:DDB_G0281547.

    Organism-specific databases

    dictyBasei DDB_G0281547. amyA.

    Phylogenomic databases

    InParanoidi Q54TS5.
    KOi K01176.
    OMAi SNDPANR.
    PhylomeDBi Q54TS5.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the social amoeba Dictyostelium discoideum."
      The Dictyostelium discoideum Sequencing Consortium
      Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
      , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
      Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AX4Imported.

    Entry informationi

    Entry nameiQ54TS5_DICDI
    AccessioniPrimary (citable) accession number: Q54TS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 24, 2005
    Last sequence update: May 24, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3