Q54S87 (Q54S87_DICDI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ceramide synthase EMBL EAL66163.1

Gene names

Name:	crsA EMBL EAL66163.1
ORF Names:	DDB_G0282607 EMBL EAL66163.1

Organism

Dictyostelium discoideum (Slime mold) [Reference proteome]

Taxonomic identifier

44689 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Amoebozoa › Mycetozoa › Dictyosteliida › Dictyostelium

Protein attributes

Sequence length	341 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities	Contains 1 TLC (TRAM/LAG1/CLN8) domain. SAAS SAAS006634
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS006634
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	ceramide biosynthetic process Inferred from sequence or structural similarity. Source: dictyBase
Cellular_component	endoplasmic reticulum Inferred from sequence or structural similarity. Source: dictyBase integral to membrane Inferred from sequence or structural similarity. Source: dictyBase
Molecular_function	sphingosine N-acyltransferase activity Inferred from sequence or structural similarity. Source: dictyBase
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q54S87 [UniParc]. Last modified May 24, 2005. Version 1. Checksum: 3E2ABDA17F072570	FASTA	341	40,450
	10 20 30 40 50 60 MALDENGVSE IEWERLYNPD NSIFLSGRKL MSEVNAIIFL VVCTNIFFVI RFFFQHYVLK 70 80 90 100 110 120 PIALSFNMRK SYTARFLENG WYTLYYISFF LIGSYVYSQE SWSIFPTMNI WLGWPTQPFS 130 140 150 160 170 180 TLFRTYYLIE LSFYVHCTIA LFFETRRKDF NQMLTHHVAT FFLVGCSYWY RYHRIGIAIL 190 200 210 220 230 240 WIHNIADIFL YSAKALNYIS KEVKNKTIQI ICDGLFVMFA VSFFVTRLIF FPFTLIKSSL 250 260 270 280 290 300 TEAYYVSVEF PLFYPTNVAL LTLLILHMFW FFLIARIIYI KLFKSKDFDD IRSDSDEDEE 310 320 330 340 VKPTQKGLEA EPTRTNKNTN NNKNNKLTQT KVSKAAQKKN E

References

[1]

"The genome of the social amoeba Dictyostelium discoideum." The Dictyostelium discoideum Sequencing Consortium Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A. Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAFI02000047 Genomic DNA. Translation: EAL66163.1.
RefSeq	XP_640152.1. XM_635060.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	44689.DDB_0230136.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	DDB0230136; DDB0230136; DDB_G0282607.
GeneID	8623690.
KEGG	ddi:DDB_G0282607.
Organism-specific databases
dictyBase	DDB_G0282607. crsA.
Phylogenomic databases
eggNOG	COG5058.
InParanoid	Q54S87.
OMA	RFLENGW.
Family and domain databases
InterPro	IPR006634. TLC-dom. [Graphical view]
Pfam	PF03798. TRAM_LAG1_CLN8. 1 hit. [Graphical view]
SMART	SM00724. TLC. 1 hit. [Graphical view]
PROSITE	PS50922. TLC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q54S87_DICDI

Accession

Primary (citable) accession number: Q54S87

Entry history

Integrated into UniProtKB/TrEMBL:	May 24, 2005
Last sequence update:	May 24, 2005
Last modified:	May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)