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Q54QC1

- GPDM_DICDI

UniProt

Q54QC1 - GPDM_DICDI

Protein

Probable glycerol-3-phosphate dehydrogenase, mitochondrial

Gene

DDB_G0283951

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (24 May 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.

    Cofactori

    FAD.By similarity

    Pathwayi

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi100 – 12829FADSequence AnalysisAdd
    BLAST

    GO - Molecular functioni

    1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycerol-3-phosphate metabolic process Source: InterPro
    2. glycerol catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    FAD, Flavoprotein

    Enzyme and pathway databases

    UniPathwayiUPA00618; UER00673.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable glycerol-3-phosphate dehydrogenase, mitochondrial (EC:1.1.5.3)
    Short name:
    GPD-M
    Short name:
    GPDH-M
    Gene namesi
    ORF Names:DDB_G0283951
    OrganismiDictyostelium discoideum (Slime mold)
    Taxonomic identifieri44689 [NCBI]
    Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
    ProteomesiUP000002195: Chromosome 4, UP000002195: Unassembled WGS sequence

    Organism-specific databases

    dictyBaseiDDB_G0283951.

    Subcellular locationi

    Mitochondrion By similarity

    GO - Cellular componenti

    1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
    2. mitochondrion Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini? – 638Probable glycerol-3-phosphate dehydrogenase, mitochondrialPRO_0000355967
    Transit peptidei1 – ?MitochondrionSequence Analysis

    Proteomic databases

    PRIDEiQ54QC1.

    Interactioni

    Protein-protein interaction databases

    STRINGi44689.DDBDRAFT_0185769.

    Structurei

    3D structure databases

    ProteinModelPortaliQ54QC1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0578.
    KOiK00111.
    OMAiRRMGEDT.
    PhylomeDBiQ54QC1.

    Family and domain databases

    InterProiIPR006076. FAD-dep_OxRdtase.
    IPR000447. G3P_DH_FAD-dep.
    [Graphical view]
    PfamiPF01266. DAO. 1 hit.
    [Graphical view]
    PRINTSiPR01001. FADG3PDH.
    PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
    PS00978. FAD_G3PDH_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q54QC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNQLLSKSFK PLVVAGVAVI GISAFSGNRA YDEYRKERES ISKKMINDLN    50
    ENKITMFDYF QECKTLGRDE QLSKLNKLSK VYNKQKLNEQ ENQEELIDLD 100
    LIVIGGGATG TGVALDAQSR GMKVALFEKY DFSSGTSSKS TKLVHGGIRY 150
    LESAIMKLKP SELTLVKEAL RERSNLLNNA PHLSRQLPIV IPAYSIFDAS 200
    KFWIGCKLYD FFYPFNDIPK SYLQTSAQTY KEFPFLREGL VSSVVYYDGQ 250
    HNDSRMNVSL ALTAAQQGAL TLNYTEVVEL IKDDKINNNN KQQQLKGVVI 300
    RDRLTGKKYS VPAKCVVNAT GPYCDSIRNL DDPRADPIIT ASSGVHIMLP 350
    GNLIPSDKGF LNPKTKDGRV LFILPFEGKT LVGTTDDPSP IIENPQPLEK 400
    DVEFILDSIK EYSNPNVKLD KSQVLACWSG IRPLVSDEPA AQGDNKKSTS 450
    QVTRSHSLRM SESGLITIVG GKWTTYRSMA EATVNLVCSK HDIFTPKGCI 500
    TKNLPLIGGE KYYNTLNQYL IKNFNLPEDI AEHLAHSYGD QAPFVAKLAN 550
    ENGSNKRLVE GYPYIEAEVT YGVKKEYACT AEDIIGRRTR LSFLDHDKAE 600
    IALPKIINIM APLLKWSNER KKEELKNSQN YLKTMTSK 638
    Length:638
    Mass (Da):71,425
    Last modified:May 24, 2005 - v1
    Checksum:i19DA700617840BBC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000058 Genomic DNA. Translation: EAL65463.1.
    RefSeqiXP_638823.1. XM_633731.1.

    Genome annotation databases

    EnsemblProtistsiDDB0185769; DDB0185769; DDB_G0283951.
    GeneIDi8624347.
    KEGGiddi:DDB_G0283951.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000058 Genomic DNA. Translation: EAL65463.1 .
    RefSeqi XP_638823.1. XM_633731.1.

    3D structure databases

    ProteinModelPortali Q54QC1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 44689.DDBDRAFT_0185769.

    Proteomic databases

    PRIDEi Q54QC1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi DDB0185769 ; DDB0185769 ; DDB_G0283951 .
    GeneIDi 8624347.
    KEGGi ddi:DDB_G0283951.

    Organism-specific databases

    dictyBasei DDB_G0283951.

    Phylogenomic databases

    eggNOGi COG0578.
    KOi K00111.
    OMAi RRMGEDT.
    PhylomeDBi Q54QC1.

    Enzyme and pathway databases

    UniPathwayi UPA00618 ; UER00673 .

    Miscellaneous databases

    PROi Q54QC1.

    Family and domain databases

    InterProi IPR006076. FAD-dep_OxRdtase.
    IPR000447. G3P_DH_FAD-dep.
    [Graphical view ]
    Pfami PF01266. DAO. 1 hit.
    [Graphical view ]
    PRINTSi PR01001. FADG3PDH.
    PROSITEi PS00977. FAD_G3PDH_1. 1 hit.
    PS00978. FAD_G3PDH_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the social amoeba Dictyostelium discoideum."
      Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
      , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
      Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AX4.

    Entry informationi

    Entry nameiGPDM_DICDI
    AccessioniPrimary (citable) accession number: Q54QC1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 16, 2008
    Last sequence update: May 24, 2005
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Dictyostelium discoideum
      Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3