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Q54QC1 (GPDM_DICDI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable glycerol-3-phosphate dehydrogenase, mitochondrial

Short name=GPD-M
Short name=GPDH-M
EC=1.1.5.3
Gene names
ORF Names:DDB_G0283951
OrganismDictyostelium discoideum (Slime mold) [Reference proteome]
Taxonomic identifier44689 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length638 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.

Cofactor

FAD By similarity.

Pathway

Polyol metabolism; glycerol degradation via glycerol kinase pathway; glycerone phosphate from sn-glycerol 3-phosphate (anaerobic route): step 1/1.

Subcellular location

Mitochondrion By similarity.

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – ?Mitochondrion Potential
Chain? – 638Probable glycerol-3-phosphate dehydrogenase, mitochondrialPRO_0000355967

Regions

Nucleotide binding100 – 12829FAD Potential

Sequences

Sequence LengthMass (Da)Tools
Q54QC1 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: 19DA700617840BBC

FASTA63871,425
        10         20         30         40         50         60 
MNQLLSKSFK PLVVAGVAVI GISAFSGNRA YDEYRKERES ISKKMINDLN ENKITMFDYF 

        70         80         90        100        110        120 
QECKTLGRDE QLSKLNKLSK VYNKQKLNEQ ENQEELIDLD LIVIGGGATG TGVALDAQSR 

       130        140        150        160        170        180 
GMKVALFEKY DFSSGTSSKS TKLVHGGIRY LESAIMKLKP SELTLVKEAL RERSNLLNNA 

       190        200        210        220        230        240 
PHLSRQLPIV IPAYSIFDAS KFWIGCKLYD FFYPFNDIPK SYLQTSAQTY KEFPFLREGL 

       250        260        270        280        290        300 
VSSVVYYDGQ HNDSRMNVSL ALTAAQQGAL TLNYTEVVEL IKDDKINNNN KQQQLKGVVI 

       310        320        330        340        350        360 
RDRLTGKKYS VPAKCVVNAT GPYCDSIRNL DDPRADPIIT ASSGVHIMLP GNLIPSDKGF 

       370        380        390        400        410        420 
LNPKTKDGRV LFILPFEGKT LVGTTDDPSP IIENPQPLEK DVEFILDSIK EYSNPNVKLD 

       430        440        450        460        470        480 
KSQVLACWSG IRPLVSDEPA AQGDNKKSTS QVTRSHSLRM SESGLITIVG GKWTTYRSMA 

       490        500        510        520        530        540 
EATVNLVCSK HDIFTPKGCI TKNLPLIGGE KYYNTLNQYL IKNFNLPEDI AEHLAHSYGD 

       550        560        570        580        590        600 
QAPFVAKLAN ENGSNKRLVE GYPYIEAEVT YGVKKEYACT AEDIIGRRTR LSFLDHDKAE 

       610        620        630 
IALPKIINIM APLLKWSNER KKEELKNSQN YLKTMTSK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAFI02000058 Genomic DNA. Translation: EAL65463.1.

3D structure databases

ProteinModelPortalQ54QC1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING44689.DDBDRAFT_0185769.

Proteomic databases

PRIDEQ54QC1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsDDB0185769; DDB0185769; DDB_G0283951.
KEGGddi:DDB_G0283951.

Organism-specific databases

dictyBaseDDB_G0283951.

Phylogenomic databases

eggNOGCOG0578.
KOK00111.
OMAHALMVPK.
PhylomeDBQ54QC1.
ProtClustDBCLSZ2728956.

Enzyme and pathway databases

UniPathwayUPA00618; UER00673.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROQ54QC1.

Entry information

Entry nameGPDM_DICDI
AccessionPrimary (citable) accession number: Q54QC1
Entry history
Integrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: May 24, 2005
Last modified: April 16, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Dictyostelium discoideum

Dictyostelium discoideum: entries, gene names and cross-references to dictyBase