Q54EP3 (POP5_DICDI) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 44.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Probable ribonuclease P/MRP protein subunit POP5 EC=3.1.26.5 | ||||
| Gene names |
| ||||
| Organism | Dictyostelium discoideum (Slime mold) [Reference proteome] | ||||
| Taxonomic identifier | 44689 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Amoebozoa › Mycetozoa › Dictyosteliida › Dictyostelium![]() |
Protein attributes
| Sequence length | 171 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP By similarity. |
| Catalytic activity | Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. |
| Subcellular location | |
| Sequence similarities | Belongs to the eukaryotic/archaeal RNase P protein component 2 family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | tRNA processing |
| Cellular component | Nucleus |
| Molecular function | Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | rRNA processing Inferred by curator. Source: dictyBase tRNA processingInferred by curator. Source: dictyBase |
| Cellular_component | nucleolar ribonuclease P complex Inferred from sequence or structural similarity. Source: dictyBase ribonuclease MRP complexInferred from sequence or structural similarity. Source: dictyBase |
| Molecular_function | ribonuclease P activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 171 | 171 | Probable ribonuclease P/MRP protein subunit POP5 | PRO_0000327380 | |||
Sequences
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References
| [1] | "The genome of the social amoeba Dictyostelium discoideum." Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. Kuspa A.Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AAFI02000177 Genomic DNA. Translation: EAL61815.1. |
| RefSeq | XP_635197.1. XM_630105.1. |
3D structure databases | |
| ProteinModelPortal | Q54EP3. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 44689.DDBDRAFT_0219669. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblProtists | DDB0237627; DDB0237627; DDB_G0291662. |
| GeneID | 8628142. |
| KEGG | ddi:DDB_G0291662. |
Organism-specific databases | |
| dictyBase | DDB_G0291662. pop5. |
Phylogenomic databases | |
| eggNOG | COG1369. |
| KO | K03537. |
| OMA | FQFISNE. |
| ProtClustDB | CLSZ2429561. |
Family and domain databases | |
| InterPro | IPR016819. RNase_P/MRP_POP5. IPR002759. RNase_P/MRP_subunit. [Graphical view] |
| Pfam | PF01900. RNase_P_Rpp14. 1 hit. [Graphical view] |
| PIRSF | PIRSF023803. Ribonuclease_P_prd. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | POP5_DICDI | ||||||||
| Accession | Primary (citable) accession number: Q54EP3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
Relevant documents
| Dictyostelium discoideum Dictyostelium discoideum: entries, gene names and cross-references to dictyBase |
| SIMILARITY comments Index of protein domains and families |

Clusters with
