Reviewed,
UniProtKB/Swiss-Prot Q54EP3 (POP5_DICDI)
Last modified
November 3, 2009.
Version 28.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Probable ribonuclease P/MRP protein subunit POP5 EC=3.1.26.5 | ||||
| Gene names |
| ||||
| Organism | Dictyostelium discoideum (Slime mold) [Complete proteome] | ||||
| Taxonomic identifier | 44689 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Amoebozoa › Mycetozoa › Dictyosteliida › Dictyostelium |
Protein attributes
| Sequence length | 171 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP By similarity. |
| Catalytic activity | Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. |
| Subcellular location | |
| Sequence similarities | Belongs to the eukaryotic/archaeal RNase P protein component 2 family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | tRNA processing |
| Cellular component | Nucleus |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | nucleolus Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ribonuclease P activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 171 | 171 | Probable ribonuclease P/MRP protein subunit POP5 | PRO_0000327380 | |||
Sequences
| ||||||||||||||||||
References
| [1] | "The genome of the social amoeba Dictyostelium discoideum." Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. Kuspa A.Nature 435:43-57(2005) [PubMed: 15875012] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AAFI02000177 Genomic DNA. Translation: EAL61815.1. | |
| RefSeq | XP_635197.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 3386867. |
| GenomeReviews | Gene locus pop5 in contig CM000155_GR. |
| KEGG | ddi:DDB_0237627. |
Organism-specific databases | |
| dictyBase | DDB_G0291662. pop5. |
Phylogenomic databases | |
| OMA | LTVKYFS. |
Enzyme and pathway databases | |
| BRENDA | 3.1.26.5. 424. |
Family and domain databases | |
| InterPro | IPR016819. RNase_P/MRP_POP5. IPR002759. RNase_P_related. [Graphical view] |
| Pfam | PF01900. RNase_P_Rpp14. 1 hit. [Graphical view] |
| PIRSF | PIRSF023803. Ribonuclease_P_prd. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | POP5_DICDI | ||||||||
| Accession | Primary (citable) accession number: Q54EP3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
Relevant documents
| Dictyostelium discoideum Dictyostelium discoideum: entries, gene names and cross-references to dictyBase |
| SIMILARITY comments Index of protein domains and families |

Clusters with


