Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable ribonuclease P/MRP protein subunit POP5

Gene

pop5

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP (By similarity).By similarity

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase
Biological processtRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ribonuclease P/MRP protein subunit POP5 (EC:3.1.26.5)
Gene namesi
Name:pop5
ORF Names:DDB_G0291662
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyostelidsDictyostelialesDictyosteliaceaeDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 6, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0291662 pop5

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003273801 – 171Probable ribonuclease P/MRP protein subunit POP5Add BLAST171

Proteomic databases

PaxDbiQ54EP3

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB0237627

Structurei

3D structure databases

ProteinModelPortaliQ54EP3
SMRiQ54EP3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG4639 Eukaryota
COG1369 LUCA
InParanoidiQ54EP3
KOiK03537
OMAiRYYVIRM
PhylomeDBiQ54EP3

Family and domain databases

Gene3Di3.30.70.3250, 1 hit
InterProiView protein in InterPro
IPR002759 RNase_P/MRP_subunit
IPR038085 Rnp2-like_sf
PfamiView protein in Pfam
PF01900 RNase_P_Rpp14, 1 hit
SUPFAMiSSF160350 SSF160350, 1 hit

Sequencei

Sequence statusi: Complete.

Q54EP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRLKNRYLM TEVIWHDNEK STQLSDSWLF QFISNEVKEK LGELTYEAFK
60 70 80 90 100
KTLKIIYVNP DTNIFIIRVS FEYYKSLWTA LTLITSYYGV PIYFRMVHVG
110 120 130 140 150
GSIRLCQKAA IKIFGKQISV YDKNKILRNE KGETIDNNNN KNEEPSIKMD
160 170
SDDDENGGGD DGEDNDSEMK D
Length:171
Mass (Da):19,916
Last modified:May 24, 2005 - v1
Checksum:i0225413D5ACE16C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000177 Genomic DNA Translation: EAL61815.1
RefSeqiXP_635197.1, XM_630105.1

Genome annotation databases

EnsemblProtistsiEAL61815; EAL61815; DDB_G0291662
GeneIDi8628142
KEGGiddi:DDB_G0291662

Similar proteinsi

Entry informationi

Entry nameiPOP5_DICDI
AccessioniPrimary (citable) accession number: Q54EP3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: May 24, 2005
Last modified: March 28, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health