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Protein

ABC transporter A family member 9

Gene

abcA9

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi565 – 5728ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

  • lipid transport Source: GO_Central
  • sorocarp morphogenesis Source: dictyBase
Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter A family member 9
Alternative name(s):
ABC transporter ABCA.9
Gene namesi
Name:abcA9
Synonyms:abcA12
ORF Names:DDB_G0291980
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 6, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0291980. abcA9.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei33 – 5321HelicalSequence analysisAdd
BLAST
Transmembranei192 – 21221HelicalSequence analysisAdd
BLAST
Transmembranei235 – 25521HelicalSequence analysisAdd
BLAST
Transmembranei292 – 31221HelicalSequence analysisAdd
BLAST
Transmembranei318 – 33821HelicalSequence analysisAdd
BLAST
Transmembranei347 – 36721HelicalSequence analysisAdd
BLAST
Transmembranei417 – 43721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 845845ABC transporter A family member 9PRO_0000363841Add
BLAST

Proteomic databases

PaxDbiQ54DT1.
PRIDEiQ54DT1.

Structurei

3D structure databases

ProteinModelPortaliQ54DT1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini531 – 762232ABC transporterPROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi283 – 35472Phe-richAdd
BLAST

Sequence similaritiesi

Contains 1 ABC transporter domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IPJG. Eukaryota.
ENOG410XR3G. LUCA.
InParanoidiQ54DT1.
OMAiMKGVSDM.
PhylomeDBiQ54DT1.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR026082. ABC_A.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR19229. PTHR19229. 2 hits.
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q54DT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWGASDKKYK SNQFRAMFFK NATFIKRQKC SLCVQISIPL ILVIILVIVN
60 70 80 90 100
FWVKSQIGSL QTNGGKLMNS TSTYQYNSLT FGYMLSVNEN NITEIGYKDS
110 120 130 140 150
DGSGSGLLNY TPQLYIPAFK AYTPFFVPFA SVENMDDKIL AMKENATFES
160 170 180 190 200
LSSETLPLSA LIFNDFNVNN RSLDYTIQCE EQSRYSFYPY EAFVAFSMNT
210 220 230 240 250
MTTTILNYFL GGNGTIYKSN IATLPYYQQS TTIDIASLLG GSFYPFALSF
260 270 280 290 300
IMPLFIYSIV YEKQEKLRDL SLMMGLKIRN YWFMTYIFNF LIYFIIIVFV
310 320 330 340 350
VGVSSIFGFA VFVKGSQFAM FLFLFAWGNS MITFSFFLST FFKKTRAASI
360 370 380 390 400
FGYFLVIIAV NLNSILSYQV FKDSTPPVPY YWIPLLAFYR GMSQLSTQCG
410 420 430 440 450
IDLCPEWSAY TWEFEMSKII FWLYIDAIVY LLIALYLDQV LPREFGVPSH
460 470 480 490 500
PLFFLKPILN LFKNKDNDKS NTINGGSGGG RRFSETSSLI NSADFDVENN
510 520 530 540 550
NGEQEIVEDE DVLEEKEMII NRRYDPNEMT VIIEGLTKHY VGRPKPSVDN
560 570 580 590 600
LYLSVRKGEV LGFLGANGAG KTTTISMLTG LYTPTSGTAH VAGLDIRYDM
610 620 630 640 650
DNIHHVIGVA MQFDIFWEDL SCVETLLYFT RLKGVPPERE IQSVESILKE
660 670 680 690 700
VNLFEVKERL VKELSGGMKR RLSFAVAMTG DSSIIFLDEP STGISSELRR
710 720 730 740 750
DLWRTINDLK KNRSIILTTH SMEEADVLSS RIAIISQGKL QCIGTQNHLK
760 770 780 790 800
AKFGDGYSVR INVEEPYINT HNPTELITKF SPQAVLTESF DGSYNYRFPK
810 820 830 840
NTVISDLYQY LVSHKYDHHL QEWSFSQTSL EDVFLKISAN DDTIN
Length:845
Mass (Da):96,318
Last modified:May 24, 2005 - v1
Checksum:iCE27675E1D7F99D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000187 Genomic DNA. Translation: EAL61346.1.
AF465311 Genomic DNA. Translation: AAL85302.1.
AF491005 Genomic DNA. Translation: AAL99042.1.
RefSeqiXP_629791.1. XM_629789.1.

Genome annotation databases

EnsemblProtistsiDDB0201653; DDB0201653; DDB_G0291980.
GeneIDi8628468.
KEGGiddi:DDB_G0291980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000187 Genomic DNA. Translation: EAL61346.1.
AF465311 Genomic DNA. Translation: AAL85302.1.
AF491005 Genomic DNA. Translation: AAL99042.1.
RefSeqiXP_629791.1. XM_629789.1.

3D structure databases

ProteinModelPortaliQ54DT1.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ54DT1.
PRIDEiQ54DT1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiDDB0201653; DDB0201653; DDB_G0291980.
GeneIDi8628468.
KEGGiddi:DDB_G0291980.

Organism-specific databases

dictyBaseiDDB_G0291980. abcA9.

Phylogenomic databases

eggNOGiENOG410IPJG. Eukaryota.
ENOG410XR3G. LUCA.
InParanoidiQ54DT1.
OMAiMKGVSDM.
PhylomeDBiQ54DT1.

Miscellaneous databases

PROiQ54DT1.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR026082. ABC_A.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR19229. PTHR19229. 2 hits.
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiABCA9_DICDI
AccessioniPrimary (citable) accession number: Q54DT1
Secondary accession number(s): Q8T5Z8, Q8T6I8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: May 24, 2005
Last modified: July 6, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.