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Protein
Submitted name:

Vacuolar protein sorting 28 (Yeast), isoform CRA_a

Gene

VPS28

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Biological processProtein transportPROSITE-ProRule annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Vacuolar protein sorting 28 (Yeast), isoform CRA_aImported
Submitted name:
Vacuolar protein sorting 28-like protein isoform 1Imported
Submitted name:
Vacuolar sorting protein 28Imported
Gene namesi
Name:VPS28Imported
ORF Names:hCG_24005Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA38512.

Expressioni

Gene expression databases

BgeeiENSG00000160948.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000366565.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 120VPS28 N-terminalInterPro annotationAdd BLAST108
Domaini124 – 220VPS28 C-terminalInterPro annotationAdd BLAST97

Sequence similaritiesi

Belongs to the VPS28 family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG3284. Eukaryota.
ENOG4111IQ4. LUCA.
HOVERGENiHBG054248.
KOiK12184.
OMAiKYRLDCP.

Family and domain databases

InterProiView protein in InterPro
IPR007143. VPS28.
IPR017899. VPS28_C.
IPR017898. VPS28_N.
PANTHERiPTHR12937. PTHR12937. 1 hit.
PfamiView protein in Pfam
PF03997. VPS28. 1 hit.
PIRSFiPIRSF017535. VPS28. 1 hit.
PROSITEiView protein in PROSITE
PS51310. VPS28_C. 1 hit.
PS51313. VPS28_N. 1 hit.

Sequencei

Sequence statusi: Complete.

Q548N1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFHGIPATPG IGAPGNKPEL YEEVKLYKNA REREKYDNMA ELFAVVKTMQ
60 70 80 90 100
ALEKAYIKDC VSPSEYTAAC SRLLVQYKAA FRQVQGSEIS SIDEFCRKFR
110 120 130 140 150
LDCPLAMERI KEDRPITIKD DKGNLNRCIA DVVSLFITVM DKLRLEIRAM
160 170 180 190 200
DEIQPDLREL METMHRMSHL PPDFEGRQTV SQWLQTLSGM SASDELDDSQ
210 220
VRQMLFDLES AYNAFNRFLH A
Length:221
Mass (Da):25,425
Last modified:May 24, 2005 - v1
Checksum:iB2E1697B82D02AB8
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei221Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF316887 mRNA. Translation: AAK00314.1.
KU178635 mRNA. Translation: ALQ34093.1.
CH471162 Genomic DNA. Translation: EAW82094.1.
CH471162 Genomic DNA. Translation: EAW82100.1.
RefSeqiNP_057292.1. NM_016208.3.
UniGeneiHs.418175.
Hs.650693.

Genome annotation databases

GeneIDi51160.
KEGGihsa:51160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF316887 mRNA. Translation: AAK00314.1.
KU178635 mRNA. Translation: ALQ34093.1.
CH471162 Genomic DNA. Translation: EAW82094.1.
CH471162 Genomic DNA. Translation: EAW82100.1.
RefSeqiNP_057292.1. NM_016208.3.
UniGeneiHs.418175.
Hs.650693.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000366565.

Protocols and materials databases

DNASUi51160.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi51160.
KEGGihsa:51160.

Organism-specific databases

CTDi51160.
PharmGKBiPA38512.

Phylogenomic databases

eggNOGiKOG3284. Eukaryota.
ENOG4111IQ4. LUCA.
HOVERGENiHBG054248.
KOiK12184.
OMAiKYRLDCP.

Miscellaneous databases

ChiTaRSiVPS28. human.
GenomeRNAii51160.

Gene expression databases

BgeeiENSG00000160948.

Family and domain databases

InterProiView protein in InterPro
IPR007143. VPS28.
IPR017899. VPS28_C.
IPR017898. VPS28_N.
PANTHERiPTHR12937. PTHR12937. 1 hit.
PfamiView protein in Pfam
PF03997. VPS28. 1 hit.
PIRSFiPIRSF017535. VPS28. 1 hit.
PROSITEiView protein in PROSITE
PS51310. VPS28_C. 1 hit.
PS51313. VPS28_N. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ548N1_HUMAN
AccessioniPrimary (citable) accession number: Q548N1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: March 15, 2017
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.