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Q547J2 (Q547J2_HPV16) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

E6 protein EMBL AAL96616.1

Early protein E6 EMBL BAN15903.1

Transforming protein E6 EMBL AAM29167.1
Gene names
Name:E6 EMBL AAL96616.1
OrganismHuman papillomavirus type 16 EMBL AAL96616.1
Taxonomic identifier333760 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stagePapillomaviridaeAlphapapillomavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length158 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Host nucleus matrix By similarity SAAS SAAS001334.

Ontologies

Keywords
   Cellular componentHost nucleus SAAS SAAS001334
Gene Ontology (GO)
   Cellular_componenthost cell nuclear matrix

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q547J2 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: 01FEF5ADCFDB37EB

FASTA15819,187
        10         20         30         40         50         60 
MHQKRTAMFQ DPQERPRKLP QLCTELQTTI HDIILECVYC KQQLLRREVY DFAFRDLCIV 

        70         80         90        100        110        120 
YRDGNPYAVC DKCLKFYSKI SEYRHYCYSL YGTTLEQQYN KPLCDLLIRC INCQKPLCPE 

       130        140        150 
EKQRHLDKKQ RFHNIRGRWT GRCMSCCRSS RTRRETQL 

« Hide

References

[1]"Human papillomavirus type 16 intratypic variant infection and risk for cervical neoplasia in southern China."
Chan P.K.S., Lam C.W., Cheung T.H., Li W.W.H., Lo K.W.K., Chan M.Y.M., Cheung J.L.K., Xu L.Y., Cheng A.F.
J. Infect. Dis. 186:696-700(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: E-G187T EMBL AAL96625.1, E-G241T EMBL AAL96622.1, E-G538T EMBL AAL96626.1 and E-P EMBL AAL96616.1.
[2]"Human papillomavirus type 16 variants in Central Brazil."
Cruz M.R., Cerqueira D.M., Camara G.N.L., Silva E.O., Carvalho L.G.S., Martins C.R.F.
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bsb-102 EMBL AAM29167.1.
[3]"Diversifying selection in human papillomavirus type 16 lineages based on complete genome analyses."
Chen Z., Terai M., Fu L., Herrero R., DeSalle R., Burk R.D.
J. Virol. 79:7014-7023(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Qv15521E EMBL AAV91660.1 and Qv17722E EMBL AAV91684.1.
[4]"Genetic variability in E6 and E7 genes of human papillomavirus -16, - 18, -31 and -33 from HIV-1-positive women in Italy."
Garbuglia A.R., Carletti F., Minosse C., Piselli P., Zaniratti M.S., Serraino D., Capobianchi M.R.
New Microbiol. 30:377-382(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: P170 EMBL ABR08416.1, P209 EMBL ABR08429.1, P318 EMBL ABR08428.1, P343 EMBL ABR08417.1, P385 EMBL ABR08418.1, P403 EMBL ABR08419.1, P42 EMBL ABR08425.1 and P799 EMBL ABR08427.1.
[5]"Human papillomavirus type 16 variants in San Luis Potosi City, Mexico."
Lopez-Revilla R., Pineda M.A., Ortiz-Valdez J., Sanchez-Garza M., Riego L.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HPV16-13 EMBL ACK57856.1, HPV16-14 EMBL ACK57857.1, HPV16-15 EMBL ACK57858.1, HPV16-16 EMBL ACK57859.1, HPV16-17 EMBL ACK57860.1, HPV16-18 EMBL ACK57861.1, HPV16-20 EMBL ACK57862.1, HPV16-23 EMBL ACK57864.1, HPV16-24 EMBL ACK57865.1, HPV16-25 EMBL ACK57866.1, HPV16-26 EMBL ACK57867.1, HPV16-28 EMBL ACK57868.1, HPV16-29 EMBL ACK57869.1, HPV16-31 EMBL ACK57871.1, HPV16-32 EMBL ACK57872.1, HPV16-33 EMBL ACK57873.1, HPV16-34 EMBL ACK57874.1, HPV16-35 EMBL ACK57875.1, HPV16-36 EMBL ACK57876.1, HPV16-37 EMBL ACK57877.1 and HPV16-38 EMBL ACK57878.1.
[6]"Entire genome characterization of human papillomavirus type 16 from infected Thai women with different cytological findings."
Lurchachaiwong W., Junyangdikul P., Payungporn S., Chansaenroj J., Sampathanukul P., Tresukosol D., Termrungruanglert W., Theamboonlers A., Poovorawan Y.
Virus Genes 39:30-38(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CU1 EMBL ACS92644.1, CU4 EMBL ACS92668.1 and CU5 EMBL ACS92676.1.
[7]"Phylogenetic analysis of E6 gene in Human papillomavirus type 16."
Tsakogiannis D., Rouether I.G.A., Markoulatos P.
Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 796 EMBL ADY75575.1.
[8]"Human papillomavirus type 16 variants and their oncogenicity."
Sasaki T., Fujita H., Kikuchi K.
Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 05-440 EMBL AEV66127.1, 08-219 EMBL AEV66141.1 and 08-257 EMBL AEV66137.1.
[9]"Distribution of Human Papillomavirus and E6/E7 Variation."
Lijuan Y.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PE19 EMBL AFS64234.1.
[10]"E6 and E7 variants of human papillomavirus-16 and -52 in Japan, the Philippines, and Vietnam."
Ishizaki A., Matsushita K., Hoang H.T.T., Agdamag D.M., Nguyen C.H., Tran V.T., Sasagawa T., Saikawa K., Lihana R., Pham H.V., Bi X., Ta V.T., Pham T.V., Ichimura H.
J. Med. Virol. 85:1069-1076(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: J06-008 EMBL BAN15903.1, J06-029 EMBL BAN15905.1, J06-030 EMBL BAN15906.1, J06-046 EMBL BAN15907.1, J06-088 EMBL BAN15910.1, J07-004 EMBL BAN15911.1, J07-092 EMBL BAN15915.1, J07-129 EMBL BAN15921.1, J07-199 EMBL BAN15933.1, P1-145 EMBL BAN15942.1, P1-191 EMBL BAN15945.1, P1-98 EMBL BAN15939.1, P7-108 EMBL BAN15956.1, P7-12 EMBL BAN15950.1, P7-5 EMBL BAN15949.1, P7-69 EMBL BAN15952.1 and P7-84 EMBL BAN15954.1.
[11]"Characterisation of HPV16 Genome."
Siddiqa A., Bhatti M.F., Parish J.L.
Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AS-001 EMBL AGK72246.1.
[12]"Analysis of mutations in the E6 oncogene of Human Papillomavirus 16 in cervical cancer isolates from Moroccan women."
Qmichou Z., El Mzibri M., Ennaji M.M., Khyatti M., Attaleb M.
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: E-G289 EMBL AGS42268.1, E-T350/r EMBL AGS42242.1 and NA1 EMBL AGS42355.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF486310 Genomic DNA. Translation: AAL96615.1.
AF486311 Genomic DNA. Translation: AAL96616.1.
AF486312 Genomic DNA. Translation: AAL96617.1.
AF486313 Genomic DNA. Translation: AAL96618.1.
AF486317 Genomic DNA. Translation: AAL96622.1.
AF486320 Genomic DNA. Translation: AAL96625.1.
AF486321 Genomic DNA. Translation: AAL96626.1.
AY098919 Genomic DNA. Translation: AAM29167.1.
AY686581 Genomic DNA. Translation: AAV91660.1.
AY686584 Genomic DNA. Translation: AAV91684.1.
EF422095 Genomic DNA. Translation: ABR08416.1.
EF422096 Genomic DNA. Translation: ABR08417.1.
EF422097 Genomic DNA. Translation: ABR08418.1.
EF422098 Genomic DNA. Translation: ABR08419.1.
EF422104 Genomic DNA. Translation: ABR08425.1.
EF422106 Genomic DNA. Translation: ABR08427.1.
EF422107 Genomic DNA. Translation: ABR08428.1.
EF422108 Genomic DNA. Translation: ABR08429.1.
EU880247 Genomic DNA. Translation: ACK57856.1.
EU880248 Genomic DNA. Translation: ACK57857.1.
EU880249 Genomic DNA. Translation: ACK57858.1.
EU880250 Genomic DNA. Translation: ACK57859.1.
EU880251 Genomic DNA. Translation: ACK57860.1.
EU880252 Genomic DNA. Translation: ACK57861.1.
EU880254 Genomic DNA. Translation: ACK57862.1.
EU880257 Genomic DNA. Translation: ACK57864.1.
EU880258 Genomic DNA. Translation: ACK57865.1.
EU880259 Genomic DNA. Translation: ACK57866.1.
EU880260 Genomic DNA. Translation: ACK57867.1.
EU880262 Genomic DNA. Translation: ACK57868.1.
EU880263 Genomic DNA. Translation: ACK57869.1.
EU880265 Genomic DNA. Translation: ACK57871.1.
EU880266 Genomic DNA. Translation: ACK57872.1.
EU880267 Genomic DNA. Translation: ACK57873.1.
EU880268 Genomic DNA. Translation: ACK57874.1.
EU880269 Genomic DNA. Translation: ACK57875.1.
EU880270 Genomic DNA. Translation: ACK57876.1.
EU880271 Genomic DNA. Translation: ACK57877.1.
EU880272 Genomic DNA. Translation: ACK57878.1.
FJ610146 Genomic DNA. Translation: ACS92644.1.
FJ610149 Genomic DNA. Translation: ACS92668.1.
FJ610150 Genomic DNA. Translation: ACS92676.1.
HM211089 Genomic DNA. Translation: ADY75575.1.
JN381047 Genomic DNA. Translation: AEV66127.1.
JN381057 Genomic DNA. Translation: AEV66137.1.
JN381061 Genomic DNA. Translation: AEV66141.1.
JX412120 Genomic DNA. Translation: AFS64234.1.
KC736930 Genomic DNA. Translation: AGK72246.1.
KC904798 Genomic DNA. Translation: AGS42242.1.
KC904799 Genomic DNA. Translation: AGS42243.1.
KC904800 Genomic DNA. Translation: AGS42244.1.
KC904801 Genomic DNA. Translation: AGS42245.1.
KC904802 Genomic DNA. Translation: AGS42246.1.
KC904824 Genomic DNA. Translation: AGS42268.1.
KC904911 Genomic DNA. Translation: AGS42355.1.
AB663688 Genomic DNA. Translation: BAN15903.1.
AB663690 Genomic DNA. Translation: BAN15905.1.
AB663691 Genomic DNA. Translation: BAN15906.1.
AB663692 Genomic DNA. Translation: BAN15907.1.
AB663695 Genomic DNA. Translation: BAN15910.1.
AB663696 Genomic DNA. Translation: BAN15911.1.
AB663700 Genomic DNA. Translation: BAN15915.1.
AB663706 Genomic DNA. Translation: BAN15921.1.
AB663718 Genomic DNA. Translation: BAN15933.1.
AB663724 Genomic DNA. Translation: BAN15939.1.
AB663727 Genomic DNA. Translation: BAN15942.1.
AB663730 Genomic DNA. Translation: BAN15945.1.
AB663734 Genomic DNA. Translation: BAN15949.1.
AB663735 Genomic DNA. Translation: BAN15950.1.
AB663737 Genomic DNA. Translation: BAN15952.1.
AB663739 Genomic DNA. Translation: BAN15954.1.
AB663741 Genomic DNA. Translation: BAN15956.1.
RefSeqNP_041325.1. NC_001526.2.

3D structure databases

ProteinModelPortalQ547J2.
SMRQ547J2. Positions 88-151.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1489078.

Family and domain databases

InterProIPR001334. E6.
[Graphical view]
PfamPF00518. E6. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ547J2_HPV16
AccessionPrimary (citable) accession number: Q547J2
Entry history
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)