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Q54702 (Q54702_CYAP8) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL ACK66668.1
Gene names
Name:cop23 EMBL AAC44136.1
Ordered Locus Names:PCC8801_2666 EMBL ACK66668.1
OrganismCyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1)) [Complete proteome] [HAMAP] EMBL AAC44136.1
Taxonomic identifier41431 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece

Protein attributes

Sequence length232 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AAC44136.1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential EMBL AAC44136.1
Chain29 – 232204circadian oscillating polypeptide COP23 EMBL AAC44136.1
PRO_5000144636

Sequences

Sequence LengthMass (Da)Tools
Q54702 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 58707FDF03385EA0

FASTA23224,725
        10         20         30         40         50         60 
MVNNSAKVIA TSALVAVGLL ATISGASADD KYPQYNMITE GFPSTVDWES SQAVTPHVVE 

        70         80         90        100        110        120 
KVVFACVKQD DGTYSTVEKV VRETMDPDNY PVYSTEDLSA QYGLDGKPMM VWTATLASNH 

       130        140        150        160        170        180 
PKGIYAPENR CQYVSTRLSN LSYSFGLVTP EQVAKLGEAS RNGKVNGQQV VFLSQPDAST 

       190        200        210        220        230 
ARGQNMIFTL KPDNAKQPST TLTQFQIGIS AGTAAGIGGP DLPAGKLPPV IE 

« Hide

References

« Hide 'large scale' references
[1]Chen H.
Submitted (JUN-1995) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PCC8801 EMBL AAC44136.1.
[2]"Regulation and molecular structure of a circadian oscillating protein located in the cell membrane of the prokaryote Synechococcus RF-1."
Chen H.M.
Planta 199:520-527(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PCC8801 EMBL AAC44136.1.
[3]"Complete sequence of chromosome of Cyanothece sp. PCC 8801."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Liberton M., Stoeckel J., Banerjee A., Singh A., Page L., Sato H., Zhao L., Sherman L., Pakrasi H., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PCC 8801 EMBL ACK66668.1.
[4]"Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 8801.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U29340 Genomic DNA. Translation: AAC44136.1.
CP001287 Genomic DNA. Translation: ACK66668.1.
RefSeqYP_002372824.1. NC_011726.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING41431.PCC8801_2666.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACK66668; ACK66668; PCC8801_2666.
GeneID7102063.
KEGGcyp:PCC8801_2666.
PATRIC21577645. VBICyaSp125535_2838.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG113273.
HOGENOMHOG000054666.
OMAESRCQAN.
OrthoDBEOG6T1WRR.

Enzyme and pathway databases

BioCycCSP41431:GHLK-2697-MONOMER.

Family and domain databases

InterProIPR025478. COP23.
[Graphical view]
PfamPF14218. COP23. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ54702_CYAP8
AccessionPrimary (citable) accession number: Q54702
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)