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Protein
Submitted name:

Retinal pigment epithelium derived rhodopsin homolog, isoform CRA_c

Gene

Rrh

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotationSAAS annotation, Photoreceptor proteinSAAS annotation, Receptor, Transducer

Keywords - Biological processi

Sensory transduction

Keywords - Ligandi

Chromophore

Names & Taxonomyi

Protein namesi
Submitted name:
Retinal pigment epithelium derived rhodopsin homolog, isoform CRA_cImported
Gene namesi
Name:RrhImported
ORF Names:mCG_5265Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1097709. Rrh.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei28 – 5124HelicalSequence analysisAdd
BLAST
Transmembranei63 – 8018HelicalSequence analysisAdd
BLAST
Transmembranei100 – 12021HelicalSequence analysisAdd
BLAST
Transmembranei141 – 16626HelicalSequence analysisAdd
BLAST
Transmembranei186 – 21025HelicalSequence analysisAdd
BLAST
Transmembranei243 – 26523HelicalSequence analysisAdd
BLAST
Transmembranei277 – 29721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000028012.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029648.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 294253G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3656. Eukaryota.
ENOG410XRW9. LUCA.
GeneTreeiENSGT00760000118977.
HOVERGENiHBG098035.
KOiK04253.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002962. Peropsin.
IPR027430. Retinal_BS.
IPR032972. RRH.
[Graphical view]
PANTHERiPTHR24240:SF77. PTHR24240:SF77. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR01244. PEROPSIN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
PS00238. OPSIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q543W9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSEASDFNS SGSRSEGSVF SRTEHSVIAA YLIVAGITSI LSNVVVLGIF
60 70 80 90 100
IKYKELRTPT NAVIINLAFT DIGVSSIGYP MSAASDLHGS WKFGHAGCQI
110 120 130 140 150
YAGLNIFFGM VSIGLLTVVA MDRYLTISCP DVGRRMTTNT YLSMILGAWI
160 170 180 190 200
NGLFWALMPI IGWASYAPDP TGATCTINWR NNDTSFVSYT MMVIVVNFIV
210 220 230 240 250
PLTVMFYCYY HVSRSLRLYA ASDCTAHLHR DWADQADVTK MSVIMILMFL
260 270 280 290 300
LAWSPYSIVC LWACFGNPKK IPPSMAIIAP LFAKSSTFYN PCIYVAAHKK
310 320 330
FRKAMLAMFK CQPHLAVPEP STLPMDMPQS SLAPVRI
Length:337
Mass (Da):37,209
Last modified:May 24, 2005 - v1
Checksum:i353E4E2278EDBFA6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK044717 mRNA. Translation: BAC32047.1.
CH466532 Genomic DNA. Translation: EDL12234.1.
RefSeqiNP_033128.1. NM_009102.3.
UniGeneiMm.278758.

Genome annotation databases

GeneIDi20132.
KEGGimmu:20132.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK044717 mRNA. Translation: BAC32047.1.
CH466532 Genomic DNA. Translation: EDL12234.1.
RefSeqiNP_033128.1. NM_009102.3.
UniGeneiMm.278758.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029648.

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi20132.
KEGGimmu:20132.

Organism-specific databases

CTDi10692.
MGIiMGI:1097709. Rrh.

Phylogenomic databases

eggNOGiKOG3656. Eukaryota.
ENOG410XRW9. LUCA.
GeneTreeiENSGT00760000118977.
HOVERGENiHBG098035.
KOiK04253.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000028012.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002962. Peropsin.
IPR027430. Retinal_BS.
IPR032972. RRH.
[Graphical view]
PANTHERiPTHR24240:SF77. PTHR24240:SF77. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR01244. PEROPSIN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
PS00238. OPSIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ543W9_MOUSE
AccessioniPrimary (citable) accession number: Q543W9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: September 7, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.