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Protein
Submitted name:

Retinal pigment epithelium derived rhodopsin homolog, isoform CRA_c

Gene

Rrh

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionG-protein coupled receptorUniRule annotationSAAS annotation, Photoreceptor proteinSAAS annotation, Receptor, Transducer
Biological processSensory transduction
LigandChromophore

Names & Taxonomyi

Protein namesi
Submitted name:
Retinal pigment epithelium derived rhodopsin homolog, isoform CRA_cImported
Gene namesi
Name:RrhImported
ORF Names:mCG_5265Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1097709. Rrh.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei28 – 51HelicalSequence analysisAdd BLAST24
Transmembranei63 – 80HelicalSequence analysisAdd BLAST18
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Transmembranei141 – 166HelicalSequence analysisAdd BLAST26
Transmembranei186 – 210HelicalSequence analysisAdd BLAST25
Transmembranei243 – 265HelicalSequence analysisAdd BLAST23
Transmembranei277 – 297HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000028012.
ExpressionAtlasiQ543W9. baseline and differential.

Structurei

3D structure databases

SMRiQ543W9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini42 – 294G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST253

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3656. Eukaryota.
ENOG410XRW9. LUCA.
HOVERGENiHBG098035.
KOiK04253.

Family and domain databases

CDDicd15073. 7tmA_Peropsin. 1 hit.
InterProiView protein in InterPro
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002962. Peropsin.
IPR027430. Retinal_BS.
IPR032972. RRH.
PANTHERiPTHR24240:SF77. PTHR24240:SF77. 1 hit.
PfamiView protein in Pfam
PF00001. 7tm_1. 1 hit.
PRINTSiPR00237. GPCRRHODOPSN.
PR01244. PEROPSIN.
PROSITEiView protein in PROSITE
PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
PS00238. OPSIN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q543W9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSEASDFNS SGSRSEGSVF SRTEHSVIAA YLIVAGITSI LSNVVVLGIF
60 70 80 90 100
IKYKELRTPT NAVIINLAFT DIGVSSIGYP MSAASDLHGS WKFGHAGCQI
110 120 130 140 150
YAGLNIFFGM VSIGLLTVVA MDRYLTISCP DVGRRMTTNT YLSMILGAWI
160 170 180 190 200
NGLFWALMPI IGWASYAPDP TGATCTINWR NNDTSFVSYT MMVIVVNFIV
210 220 230 240 250
PLTVMFYCYY HVSRSLRLYA ASDCTAHLHR DWADQADVTK MSVIMILMFL
260 270 280 290 300
LAWSPYSIVC LWACFGNPKK IPPSMAIIAP LFAKSSTFYN PCIYVAAHKK
310 320 330
FRKAMLAMFK CQPHLAVPEP STLPMDMPQS SLAPVRI
Length:337
Mass (Da):37,209
Last modified:May 24, 2005 - v1
Checksum:i353E4E2278EDBFA6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK044717 mRNA. Translation: BAC32047.1.
CH466532 Genomic DNA. Translation: EDL12234.1.
RefSeqiNP_033128.1. NM_009102.3.
UniGeneiMm.278758.

Genome annotation databases

GeneIDi20132.
KEGGimmu:20132.

Similar proteinsi

Entry informationi

Entry nameiQ543W9_MOUSE
AccessioniPrimary (citable) accession number: Q543W9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: October 25, 2017
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)