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Protein
Submitted name:

Putative uncharacterized protein

Gene

Zfp36l1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri114 – 142C3H1-typePROSITE-ProRule annotationAdd BLAST29
Zinc fingeri152 – 180C3H1-typePROSITE-ProRule annotationAdd BLAST29

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Submitted name:
Zinc finger protein 36, C3H type-like 1Imported
Gene namesi
Name:Zfp36l1Imported
ORF Names:mCG_19208Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:107946. Zfp36l1.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

MaxQBiQ543H2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000021127.
ExpressionAtlasiQ543H2. baseline and differential.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiQ543H2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini114 – 142C3H1-typeInterPro annotationAdd BLAST29
Domaini152 – 180C3H1-typeInterPro annotationAdd BLAST29

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri114 – 142C3H1-typePROSITE-ProRule annotationAdd BLAST29
Zinc fingeri152 – 180C3H1-typePROSITE-ProRule annotationAdd BLAST29

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1677. Eukaryota.
COG5063. LUCA.
HOVERGENiHBG008483.
KOiK18753.
OMAiLQHSYSF.
OrthoDBiEOG091G0957.

Family and domain databases

Gene3Di4.10.1000.10. 2 hits.
InterProiView protein in InterPro
IPR007635. Tis11B_N.
IPR000571. Znf_CCCH.
PfamiView protein in Pfam
PF04553. Tis11B_N. 1 hit.
PF00642. zf-CCCH. 2 hits.
SMARTiView protein in SMART
SM00356. ZnF_C3H1. 2 hits.
SUPFAMiSSF90229. SSF90229. 2 hits.
PROSITEiView protein in PROSITE
PS50103. ZF_C3H1. 2 hits.

Sequencei

Sequence statusi: Complete.

Q543H2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTTLVSATI FDLSEVLCKG NKMLNYSTPS AGGCLLDRKA VGTPAGGGFP
60 70 80 90 100
RRHSVTLPSS KFHQNQLLSS LKGEPAPSLS SRDSRFRDRS FSEGGERLLP
110 120 130 140 150
TQKQPGSGQV NSSRYKTELC RPFEENGACK YGDKCQFAHG IHELRSLTRH
160 170 180 190 200
PKYKTELCRT FHTIGFCPYG PRCHFIHNAE ERRALAGGRD LSADRPRLQH
210 220 230 240 250
SFSFAGFPSA AATAAATGLL DSPTSITPPP ILSADDLLGS PTLPDGTNNP
260 270 280 290 300
FAFSSQELAS LFAPSMGLPG GGSPTTFLFR PMSESPHMFD SPPSPQDSLS
310 320 330
DHEGYLSSSS SSHSGSDSPT LDNSRRLPIF SRLSISDD
Length:338
Mass (Da):36,385
Last modified:May 24, 2005 - v1
Checksum:iA28F2C8BF476496C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK036950 mRNA. Translation: BAC29648.1.
AK051035 mRNA. Translation: BAC34506.1.
CH466590 Genomic DNA. Translation: EDL02654.1.
RefSeqiNP_031590.1. NM_007564.5.
UniGeneiMm.235132.

Genome annotation databases

GeneIDi12192.
KEGGimmu:12192.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ543H2_MOUSE
AccessioniPrimary (citable) accession number: Q543H2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: July 5, 2017
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)