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Protein
Submitted name:

Regulator of cholesterol oxidase

Gene

orfH

Organism
Streptomyces hygroscopicus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Regulator of cholesterol oxidaseImported
Gene namesi
Name:orfHImported
OrganismiStreptomyces hygroscopicusImported
Taxonomic identifieri1912 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini817 – 870HTH luxR-type DNA-bindingInterPro annotationAdd BLAST54

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 3 hits.
InterProiIPR027417. P-loop_NTPase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011990. TPR-like_helical_dom.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52540. SSF52540. 2 hits.

Sequencei

Sequence statusi: Complete.

Q54307-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGRANGRGV VVTITGPIAC GKTELLDAAA AKADAITLRA VCSAEEQALP
60 70 80 90 100
YALIGQLIDN PALASHALEP ACPTLPGEHL SPEAENRLRS DLTRTLLALA
110 120 130 140 150
AERPVLIGID ESHANALCLL HLARRVGSAR IAMVLTELRR LTPAHSQFQA
160 170 180 190 200
ELLSLGHHRE IALRPLSPKH TAELVRAGLG PDVDEDVLTG LYRATGGNLN
210 220 230 240 250
LTRGLINDVR EAWETGGTGI SAGRAYRLAY LGSLYRCGPV PLRVARVAAV
260 270 280 290 300
LGQSANTTLV RWISGLNADA VGEATEILTE GGLLHDLRFP HPAARSVVLN
310 320 330 340 350
DMSAQERRRL HRSALEVLDD VPVEVVAHHQ VGAGLLHGPK AAEIFAKAGQ
360 370 380 390 400
ELHVRGELDT ASDYLQLAHQ ASDDAVTGMR AEAVAIERRR NPLASSRHLD
410 420 430 440 450
ELTVVARAGL LFPEHTALMI RWLGVGGRSG EAAGLLASQR PRAVTDQDRA
460 470 480 490 500
HMRAAEVSLA LVSPGTSGPD RRPRPLTPDE LANLPKAARL CAIADNAVMS
510 520 530 540 550
ALRGRPELAA AEAENVLQHA DSAAAGTTAL AALTALLYAE NTDTAQLWAD
560 570 580 590 600
KLVSETGASN EEEAGYAGPR AEAALRRGDL AAAVEAGSTV LDHRRLSTLG
610 620 630 640 650
ITAALPLSSA VAAAIRLGET ERAEKWLAQP LPQAIQDGLF GLHLLSARGQ
660 670 680 690 700
YSLATGQHES AYTAFRTCGE RMRNWGVDVP GLSLWRVDAA EALLHGRDRD
710 720 730 740 750
EGRRLVDEQL TRAMGPRSRA LTLRVQAAYS PPAKRVDLLD EAADLLLSCN
760 770 780 790 800
DQYERARVLA DLSETFSALR HHSRARGLLR QARHLAAQRG AIPLLRRLGA
810 820 830 840 850
KPGGPGWLEE SGLPQRIKSL TDAERRVASL AAGGQTNRVI ADQLFVTAST
860 870
VEQHLTDVST GSRPPAPAAE LV
Length:872
Mass (Da):92,882
Last modified:November 1, 1996 - v1
Checksum:i5B72E2DAE69A62D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X86780 Genomic DNA. Translation: CAA60471.1.
PIRiT30237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X86780 Genomic DNA. Translation: CAA60471.1.
PIRiT30237.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 3 hits.
InterProiIPR027417. P-loop_NTPase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011990. TPR-like_helical_dom.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52540. SSF52540. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ54307_STRHY
AccessioniPrimary (citable) accession number: Q54307
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.