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Protein
Submitted name:

Glycoprotein m6a, isoform CRA_b

Gene

Gpm6a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoprotein m6a, isoform CRA_bImported
Gene namesi
Name:Gpm6aImported
ORF Names:mCG_1375Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:107671. Gpm6a.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 43HelicalSequence analysisAdd BLAST23
Transmembranei83 – 105HelicalSequence analysisAdd BLAST23
Transmembranei126 – 147HelicalSequence analysisAdd BLAST22
Transmembranei213 – 241HelicalSequence analysisAdd BLAST29

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000031517.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000033915.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4800. Eukaryota.
ENOG4110EPW. LUCA.
HOVERGENiHBG000096.
OMAiEEKKVCT.
OrthoDBiEOG091G0IM5.

Family and domain databases

InterProiIPR001614. Myelin_PLP.
IPR018237. Myelin_PLP_CS.
[Graphical view]
PANTHERiPTHR11683. PTHR11683. 1 hit.
PfamiPF01275. Myelin_PLP. 1 hit.
[Graphical view]
PRINTSiPR00214. MYELINPLP.
SMARTiSM00002. PLP. 1 hit.
[Graphical view]
PROSITEiPS00575. MYELIN_PLP_1. 1 hit.
PS01004. MYELIN_PLP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q542P2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEENMEEGQT QKGCFECCIK CLGGIPYASL IATILLYAGV ALFCGCGHEA
60 70 80 90 100
LSGTVNILQT YFELARTAGD TLDVFTMIDI FKYVIYGIAA AFFVYGILLM
110 120 130 140 150
VEGFFTTGAI KDLYGDFKIT TCGRCVSAWF IMLTYLFMLA WLGVTAFTSL
160 170 180 190 200
PVYMYFNVWT ICRNTTLVEG ANLCLDLRQF GIVTIGEEKK ICTASENFLR
210 220 230 240 250
MCESTELNMT FHLFIVALAG AGAAVIAMVH YLMVLSANWA YVKDACRMQK
260 270
YEDIKSKEEQ ELHDIHSTRS KERLNAYT
Length:278
Mass (Da):31,149
Last modified:May 24, 2005 - v1
Checksum:iCEE0688873E786CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK053538 mRNA. Translation: BAC35419.1.
AK081877 mRNA. Translation: BAC38356.1.
AK147245 mRNA. Translation: BAE27793.1.
AK147280 mRNA. Translation: BAE27817.1.
CH466554 Genomic DNA. Translation: EDL35650.1.
RefSeqiNP_001240685.1. NM_001253756.1.
NP_705809.1. NM_153581.6.
UniGeneiMm.241700.

Genome annotation databases

GeneIDi234267.
KEGGimmu:234267.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK053538 mRNA. Translation: BAC35419.1.
AK081877 mRNA. Translation: BAC38356.1.
AK147245 mRNA. Translation: BAE27793.1.
AK147280 mRNA. Translation: BAE27817.1.
CH466554 Genomic DNA. Translation: EDL35650.1.
RefSeqiNP_001240685.1. NM_001253756.1.
NP_705809.1. NM_153581.6.
UniGeneiMm.241700.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000033915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi234267.
KEGGimmu:234267.

Organism-specific databases

CTDi2823.
MGIiMGI:107671. Gpm6a.

Phylogenomic databases

eggNOGiKOG4800. Eukaryota.
ENOG4110EPW. LUCA.
HOVERGENiHBG000096.
OMAiEEKKVCT.
OrthoDBiEOG091G0IM5.

Miscellaneous databases

ChiTaRSiGpm6a. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000031517.

Family and domain databases

InterProiIPR001614. Myelin_PLP.
IPR018237. Myelin_PLP_CS.
[Graphical view]
PANTHERiPTHR11683. PTHR11683. 1 hit.
PfamiPF01275. Myelin_PLP. 1 hit.
[Graphical view]
PRINTSiPR00214. MYELINPLP.
SMARTiSM00002. PLP. 1 hit.
[Graphical view]
PROSITEiPS00575. MYELIN_PLP_1. 1 hit.
PS01004. MYELIN_PLP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ542P2_MOUSE
AccessioniPrimary (citable) accession number: Q542P2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: November 30, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.