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Protein
Submitted name:

Coatomer protein complex, subunit zeta 1, isoform CRA_c

Gene

Copz1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transportSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Coatomer protein complex, subunit zeta 1, isoform CRA_cImported
Submitted name:
Copz1 proteinImported
Gene namesi
Name:Copz1Imported
ORF Names:mCG_15682Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1929063. Copz1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

TopDownProteomicsiQ542M2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000060992.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000097738.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 151Clat_adaptor_sInterPro annotationAdd BLAST140

Phylogenomic databases

eggNOGiKOG3343. Eukaryota.
COG5541. LUCA.
HOVERGENiHBG051077.
KOiK20472.
OMAiDSLDIVM.
OrthoDBiEOG091G0TM0.

Family and domain databases

InterProiIPR022775. AP_mu_sigma_su.
IPR000804. Clathrin_sm-chain_CS.
IPR011012. Longin-like_dom.
[Graphical view]
PfamiPF01217. Clat_adaptor_s. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS00989. CLAT_ADAPTOR_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q542M2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEALILEPSL YTVKAILILD NDGDRLFAKY YDDTYPSVKE QKAFEKNIFN
60 70 80 90 100
KTHRTDSEIA LLEGLTVVYK SSIDLYFYVI GSSYENELML MAVLNCLFDS
110 120 130 140 150
LSQMLRKNVE KRALLENMEG LFLAVDEIVD GGVILESDPQ QVVHRVALRG
160 170
EDVPLTEQTV SQVLQSAKEQ IKWSLLR
Length:177
Mass (Da):20,198
Last modified:May 24, 2005 - v1
Checksum:i355530D032D3A049
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110679 mRNA. Translation: AAI10680.1.
AK083824 mRNA. Translation: BAC39030.1.
AK156758 mRNA. Translation: BAE33841.1.
AK167636 mRNA. Translation: BAE39687.1.
AK168382 mRNA. Translation: BAE40310.1.
AK168471 mRNA. Translation: BAE40362.1.
CH466550 Genomic DNA. Translation: EDL03927.1.
RefSeqiNP_062791.1. NM_019817.1.
UniGeneiMm.29473.

Genome annotation databases

GeneIDi56447.
KEGGimmu:56447.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110679 mRNA. Translation: AAI10680.1.
AK083824 mRNA. Translation: BAC39030.1.
AK156758 mRNA. Translation: BAE33841.1.
AK167636 mRNA. Translation: BAE39687.1.
AK168382 mRNA. Translation: BAE40310.1.
AK168471 mRNA. Translation: BAE40362.1.
CH466550 Genomic DNA. Translation: EDL03927.1.
RefSeqiNP_062791.1. NM_019817.1.
UniGeneiMm.29473.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000097738.

Proteomic databases

TopDownProteomicsiQ542M2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi56447.
KEGGimmu:56447.

Organism-specific databases

CTDi22818.
MGIiMGI:1929063. Copz1.

Phylogenomic databases

eggNOGiKOG3343. Eukaryota.
COG5541. LUCA.
HOVERGENiHBG051077.
KOiK20472.
OMAiDSLDIVM.
OrthoDBiEOG091G0TM0.

Miscellaneous databases

ChiTaRSiCopz1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000060992.

Family and domain databases

InterProiIPR022775. AP_mu_sigma_su.
IPR000804. Clathrin_sm-chain_CS.
IPR011012. Longin-like_dom.
[Graphical view]
PfamiPF01217. Clat_adaptor_s. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS00989. CLAT_ADAPTOR_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ542M2_MOUSE
AccessioniPrimary (citable) accession number: Q542M2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: November 30, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.