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Protein
Submitted name:

Recombination activating gene 2

Gene

Rag2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Recombination activating gene 2Imported
Gene namesi
Name:Rag2Imported
ORF Names:mCG_12559Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:97849. Rag2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000032864.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038204.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini414 – 491RAG2_PHDInterPro annotationAdd BLAST78

Phylogenomic databases

eggNOGiENOG410IJ5S. Eukaryota.
ENOG4110081. LUCA.
HOVERGENiHBG006694.
KOiK10988.
OMAiFGQKGWP.
OrthoDBiEOG091G052K.

Family and domain databases

CDDicd15569. PHD_RAG2. 1 hit.
Gene3Di2.120.10.80. 1 hit.
InterProiIPR011043. Gal_Oxase/kelch_b-propeller.
IPR015915. Kelch-typ_b-propeller.
IPR004321. RAG2.
IPR025162. RAG2_PHD.
IPR011011. Znf_FYVE_PHD.
[Graphical view]
PANTHERiPTHR10960. PTHR10960. 1 hit.
PfamiPF03089. RAG2. 1 hit.
PF13341. RAG2_PHD. 1 hit.
[Graphical view]
SUPFAMiSSF50965. SSF50965. 1 hit.
SSF57903. SSF57903. 1 hit.

Sequencei

Sequence statusi: Complete.

Q542D1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLQMVTVGH NIALIQPGFS LMNFDGQVFF FGQKGWPKRS CPTGVFHFDI
60 70 80 90 100
KQNHLKLKPA IFSKDSCYLP PLRYPATCSY KGSIDSDKHQ YIIHGGKTPN
110 120 130 140 150
NELSDKIYIM SVACKNNKKV TFRCTEKDLV GDVPEPRYGH SIDVVYSRGK
160 170 180 190 200
SMGVLFGGRS YMPSTQRTTE KWNSVADCLP HVFLIDFEFG CATSYILPEL
210 220 230 240 250
QDGLSFHVSI ARNDTVYILG GHSLASNIRP ANLYRIRVDL PLGTPAVNCT
260 270 280 290 300
VLPGGISVSS AILTQTNNDE FVIVGGYQLE NQKRMVCSLV SLGDNTIEIS
310 320 330 340 350
EMETPDWTSD IKHSKIWFGS NMGNGTIFLG IPGDNKQAMS EAFYFYTLRC
360 370 380 390 400
SEEDLSEDQK IVSNSQTSTE DPGDSTPFED SEEFCFSAEA TSFDGDDEFD
410 420 430 440 450
TYNEDDEDDE SVTGYWITCC PTCDVDINTW VPFYSTELNK PAMIYCSHGD
460 470 480 490 500
GHWVHAQCMD LEERTLIHLS EGSNKYYCNE HVQIARALQT PKRNPPLQKP
510 520
PMKSLHKKGS GKVLTPAKKS FLRRLFD
Length:527
Mass (Da):59,074
Last modified:May 24, 2005 - v1
Checksum:i51086F95A4A664A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC120548 mRNA. Translation: AAI20549.1.
BC125473 mRNA. Translation: AAI25474.1.
AK040375 mRNA. Translation: BAC30576.1.
AK089075 mRNA. Translation: BAC40737.1.
CH466519 Genomic DNA. Translation: EDL27654.1.
RefSeqiNP_033046.1. NM_009020.3.
XP_017172095.1. XM_017316606.1.
UniGeneiMm.4988.

Genome annotation databases

GeneIDi19374.
KEGGimmu:19374.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC120548 mRNA. Translation: AAI20549.1.
BC125473 mRNA. Translation: AAI25474.1.
AK040375 mRNA. Translation: BAC30576.1.
AK089075 mRNA. Translation: BAC40737.1.
CH466519 Genomic DNA. Translation: EDL27654.1.
RefSeqiNP_033046.1. NM_009020.3.
XP_017172095.1. XM_017316606.1.
UniGeneiMm.4988.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038204.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi19374.
KEGGimmu:19374.

Organism-specific databases

CTDi5897.
MGIiMGI:97849. Rag2.

Phylogenomic databases

eggNOGiENOG410IJ5S. Eukaryota.
ENOG4110081. LUCA.
HOVERGENiHBG006694.
KOiK10988.
OMAiFGQKGWP.
OrthoDBiEOG091G052K.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000032864.

Family and domain databases

CDDicd15569. PHD_RAG2. 1 hit.
Gene3Di2.120.10.80. 1 hit.
InterProiIPR011043. Gal_Oxase/kelch_b-propeller.
IPR015915. Kelch-typ_b-propeller.
IPR004321. RAG2.
IPR025162. RAG2_PHD.
IPR011011. Znf_FYVE_PHD.
[Graphical view]
PANTHERiPTHR10960. PTHR10960. 1 hit.
PfamiPF03089. RAG2. 1 hit.
PF13341. RAG2_PHD. 1 hit.
[Graphical view]
SUPFAMiSSF50965. SSF50965. 1 hit.
SSF57903. SSF57903. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ542D1_MOUSE
AccessioniPrimary (citable) accession number: Q542D1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: November 30, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.