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Protein
Submitted name:

Ccr6 protein

Gene

Ccr6

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
Ccr6 proteinImported
Submitted name:
MCG8581Imported
Gene namesi
Name:Ccr6Imported
ORF Names:mCG_8581Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1333797. Ccr6.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei43 – 6523HelicalSequence analysisAdd
BLAST
Transmembranei77 – 9721HelicalSequence analysisAdd
BLAST
Transmembranei117 – 13721HelicalSequence analysisAdd
BLAST
Transmembranei158 – 17720HelicalSequence analysisAdd
BLAST
Transmembranei211 – 23424HelicalSequence analysisAdd
BLAST
Transmembranei246 – 27126HelicalSequence analysisAdd
BLAST
Transmembranei291 – 31121HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000040899.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000095029.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini55 – 308254G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IKPR. Eukaryota.
ENOG410XSP7. LUCA.
GeneTreeiENSGT00760000118785.
HOVERGENiHBG106917.
KOiK04181.
OMAiCYMFIVK.
OrthoDBiEOG091G08B0.

Family and domain databases

InterProiIPR004067. Chemokine_CCR6.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00657. CCCHEMOKINER.
PR01529. CHEMOKINER6.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q542B6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSTESYFGT DDYDNTEYYS IPPDHGPCSL EEVRNFTKVF VPIAYSLICV
60 70 80 90 100
FGLLGNIMVV MTFAFYKKAR SMTDVYLLNM AITDILFVLT LPFWAVTHAT
110 120 130 140 150
NTWVFSDALC KLMKGTYAVN FNCGMLLLAC ISMDRYIAIV QATKSFRVRS
160 170 180 190 200
RTLTHSKVIC VAVWFISIII SSPTFIFNKK YELQDRDVCE PRYRSVSEPI
210 220 230 240 250
TWKLLGMGLE LFFGFFTPLL FMVFCYLFII KTLVQAQNSK RHRAIRVVIA
260 270 280 290 300
VVLVFLACQI PHNMVLLVTA VNTGKVGRSC STEKVLAYTR NVAEVLAFLH
310 320 330 340 350
CCLNPVLYAF IGQKFRNYFM KIMKDVWCMR RKNKMPGFLC ARVYSESYIS
360
RQTSETVEND NASSFTM
Length:367
Mass (Da):42,103
Last modified:May 24, 2005 - v1
Checksum:i6A309AF833B1117E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC100756 mRNA. Translation: AAI00757.1.
BC100757 mRNA. Translation: AAI00758.1.
BC100758 mRNA. Translation: AAI00759.1.
BC105669 mRNA. Translation: AAI05670.1.
AK089712 mRNA. Translation: BAC40946.1.
CH466619 Genomic DNA. Translation: EDL02125.1.
RefSeqiNP_001177262.1. NM_001190333.1.
NP_001177263.1. NM_001190334.1.
NP_001177264.1. NM_001190335.1.
NP_001177265.1. NM_001190336.1.
NP_001177266.1. NM_001190337.1.
NP_033965.1. NM_009835.4.
XP_006523345.1. XM_006523282.2.
XP_006523346.1. XM_006523283.2.
XP_006523347.1. XM_006523284.2.
XP_006523349.1. XM_006523286.2.
XP_006523351.1. XM_006523288.2.
XP_006523353.1. XM_006523290.2.
XP_006523354.1. XM_006523291.1.
XP_006523355.1. XM_006523292.2.
XP_011244488.1. XM_011246186.1.
XP_011244489.1. XM_011246187.1.
XP_011244490.1. XM_011246188.1.
XP_011244491.1. XM_011246189.1.
UniGeneiMm.8007.

Genome annotation databases

GeneIDi12458.
KEGGimmu:12458.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC100756 mRNA. Translation: AAI00757.1.
BC100757 mRNA. Translation: AAI00758.1.
BC100758 mRNA. Translation: AAI00759.1.
BC105669 mRNA. Translation: AAI05670.1.
AK089712 mRNA. Translation: BAC40946.1.
CH466619 Genomic DNA. Translation: EDL02125.1.
RefSeqiNP_001177262.1. NM_001190333.1.
NP_001177263.1. NM_001190334.1.
NP_001177264.1. NM_001190335.1.
NP_001177265.1. NM_001190336.1.
NP_001177266.1. NM_001190337.1.
NP_033965.1. NM_009835.4.
XP_006523345.1. XM_006523282.2.
XP_006523346.1. XM_006523283.2.
XP_006523347.1. XM_006523284.2.
XP_006523349.1. XM_006523286.2.
XP_006523351.1. XM_006523288.2.
XP_006523353.1. XM_006523290.2.
XP_006523354.1. XM_006523291.1.
XP_006523355.1. XM_006523292.2.
XP_011244488.1. XM_011246186.1.
XP_011244489.1. XM_011246187.1.
XP_011244490.1. XM_011246188.1.
XP_011244491.1. XM_011246189.1.
UniGeneiMm.8007.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000095029.

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi12458.
KEGGimmu:12458.

Organism-specific databases

CTDi1235.
MGIiMGI:1333797. Ccr6.

Phylogenomic databases

eggNOGiENOG410IKPR. Eukaryota.
ENOG410XSP7. LUCA.
GeneTreeiENSGT00760000118785.
HOVERGENiHBG106917.
KOiK04181.
OMAiCYMFIVK.
OrthoDBiEOG091G08B0.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000040899.

Family and domain databases

InterProiIPR004067. Chemokine_CCR6.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00657. CCCHEMOKINER.
PR01529. CHEMOKINER6.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ542B6_MOUSE
AccessioniPrimary (citable) accession number: Q542B6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: September 7, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.