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Protein
Submitted name:

Putative uncharacterized protein

Gene

Exosc4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Exosc4Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1923576. Exosc4.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000034259.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000050940.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini21 – 152132RNase_PHInterPro annotationAdd
BLAST
Domaini156 – 21964RNase_PH_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1068. Eukaryota.
COG0689. LUCA.
HOVERGENiHBG051519.
KOiK11600.
OMAiDITLLQM.
OrthoDBiEOG091G0HG5.

Family and domain databases

Gene3Di3.30.230.70. 1 hit.
InterProiIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
[Graphical view]
PfamiPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.

Sequencei

Sequence statusi: Complete.

Q542B0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGLELLSDQ GYRIDGRRAG ELRKIQARMG VFAQADGSAY IEQGNTKALA
60 70 80 90 100
VVYGPHEIRG SRSRALPDRA LVNCQYSSAT FSTGERKRRP HGDRKSCEMG
110 120 130 140 150
LQLRQTFEAA ILTQLHPRSQ IDIYVQVLQA DGGTYAACVN AATLAVMDAG
160 170 180 190 200
IPMRDFVCAC SAGFVDGTAL ADLSHVEEAA GGPQLALALL PASGQIALLE
210 220 230 240
MDSRLHEDHL EQVLEAAAQA ARGVHTLLDL VVRQHVQEAS VSLGD
Length:245
Mass (Da):26,250
Last modified:May 24, 2005 - v1
Checksum:iE06C1CA2CA1FBF57
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK089890 mRNA. Translation: BAC40987.1.
AK144062 mRNA. Translation: BAE25679.1.
AK167629 mRNA. Translation: BAE39680.1.
RefSeqiNP_780608.1. NM_175399.4.
UniGeneiMm.322752.

Genome annotation databases

GeneIDi109075.
KEGGimmu:109075.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK089890 mRNA. Translation: BAC40987.1.
AK144062 mRNA. Translation: BAE25679.1.
AK167629 mRNA. Translation: BAE39680.1.
RefSeqiNP_780608.1. NM_175399.4.
UniGeneiMm.322752.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000050940.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi109075.
KEGGimmu:109075.

Organism-specific databases

CTDi54512.
MGIiMGI:1923576. Exosc4.

Phylogenomic databases

eggNOGiKOG1068. Eukaryota.
COG0689. LUCA.
HOVERGENiHBG051519.
KOiK11600.
OMAiDITLLQM.
OrthoDBiEOG091G0HG5.

Miscellaneous databases

ChiTaRSiExosc4. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000034259.

Family and domain databases

Gene3Di3.30.230.70. 1 hit.
InterProiIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
[Graphical view]
PfamiPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ542B0_MOUSE
AccessioniPrimary (citable) accession number: Q542B0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.