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Protein
Submitted name:

Epididymis secretory protein Li 85

Gene

PCBP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Epididymis secretory protein Li 85Imported
Submitted name:
Poly(RC) binding protein 1Imported
Submitted name:
Putative uncharacterized protein PCBP1Imported
Submitted name:
cDNA, FLJ94964, highly similar to Homo sapiens poly(rC) binding protein 1 (PCBP1), mRNAImported
Gene namesi
Name:PCBP1Imported
Synonyms:HEL-S-85Imported
ORF Names:hCG_1776997Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA32986.

Expressioni

Gene expression databases

BgeeiENSG00000169564.

Interactioni

Protein-protein interaction databases

MINTiMINT-4999256.
STRINGi9606.ENSP00000305556.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 75KHInterPro annotationAdd BLAST63
Domaini97 – 162KHInterPro annotationAdd BLAST66
Domaini279 – 343KHInterPro annotationAdd BLAST65

Sequence similaritiesi

Contains 3 KH domains.UniRule annotation

Phylogenomic databases

eggNOGiKOG2190. Eukaryota.
ENOG410XNN8. LUCA.
HOVERGENiHBG053520.
KOiK12889.
OMAiTIAGMPQ.
OrthoDBiEOG091G0DHI.

Family and domain databases

Gene3Di3.30.1370.10. 3 hits.
InterProiIPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
PfamiPF00013. KH_1. 3 hits.
[Graphical view]
SMARTiSM00322. KH. 3 hits.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 3 hits.
PROSITEiPS50084. KH_TYPE_1. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q53SS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAGVTESGL NVTLTIRLLM HGKEVGSIIG KKGESVKRIR EESGARINIS
60 70 80 90 100
EGNCPERIIT LTGPTNAIFK AFAMIIDKLE EDINSSMTNS TAASRPPVTL
110 120 130 140 150
RLVVPATQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG
160 170 180 190 200
VPQSVTECVK QICLVMLETL SQSPQGRVMT IPYQPMPASS PVICAGGQDR
210 220 230 240 250
CSDAAGYPHA THDLEGPPLD AYSIQGQHTI SPLDLAKLNQ VARQQSHFAM
260 270 280 290 300
MHGGTGFAGI DSSSPEVKGY WASLDASTQT THELTIPNNL IGCIIGRQGA
310 320 330 340 350
NINEIRQMSG AQIKIANPVE GSSGRQVTIT GSAASISLAQ YLINARLSSE

KGMGCS
Length:356
Mass (Da):37,498
Last modified:May 24, 2005 - v1
Checksum:i6D1A261276CA206D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC016700 Genomic DNA. Translation: AAX93191.1.
FJ224329 mRNA. Translation: ACI46021.1.
AK314225 mRNA. Translation: BAG36897.1.
CH471053 Genomic DNA. Translation: EAW99834.1.
RefSeqiNP_006187.2. NM_006196.3.
UniGeneiHs.2853.

Genome annotation databases

GeneIDi5093.
KEGGihsa:5093.
UCSCiuc002sgf.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC016700 Genomic DNA. Translation: AAX93191.1.
FJ224329 mRNA. Translation: ACI46021.1.
AK314225 mRNA. Translation: BAG36897.1.
CH471053 Genomic DNA. Translation: EAW99834.1.
RefSeqiNP_006187.2. NM_006196.3.
UniGeneiHs.2853.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4999256.
STRINGi9606.ENSP00000305556.

Protocols and materials databases

DNASUi5093.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5093.
KEGGihsa:5093.
UCSCiuc002sgf.4. human.

Organism-specific databases

CTDi5093.
PharmGKBiPA32986.

Phylogenomic databases

eggNOGiKOG2190. Eukaryota.
ENOG410XNN8. LUCA.
HOVERGENiHBG053520.
KOiK12889.
OMAiTIAGMPQ.
OrthoDBiEOG091G0DHI.

Miscellaneous databases

ChiTaRSiPCBP1. human.
GenomeRNAii5093.

Gene expression databases

BgeeiENSG00000169564.

Family and domain databases

Gene3Di3.30.1370.10. 3 hits.
InterProiIPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
PfamiPF00013. KH_1. 3 hits.
[Graphical view]
SMARTiSM00322. KH. 3 hits.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 3 hits.
PROSITEiPS50084. KH_TYPE_1. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ53SS8_HUMAN
AccessioniPrimary (citable) accession number: Q53SS8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: November 2, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.