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Protein

Probable NAD kinase 2, chloroplastic

Gene

Os11g0191400

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in chlorophyll synthesis and chloroplast protection against oxidative damage.By similarity

Catalytic activityi

ATP + NAD+ = ADP + NADP+.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Ligandi

ATP-binding, Calmodulin-binding, NAD, NADP, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable NAD kinase 2, chloroplastic (EC:2.7.1.23)
Gene namesi
Ordered Locus Names:Os11g0191400, LOC_Os11g08670
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 11, cultivar: Nipponbare

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 981Probable NAD kinase 2, chloroplasticPRO_0000233706
Transit peptidei1 – ?ChloroplastSequence analysis

Proteomic databases

PaxDbiQ53NI2.
PRIDEiQ53NI2.

Expressioni

Gene expression databases

ExpressionAtlasiQ53NI2. baseline and differential.
GenevisibleiQ53NI2. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os11g08670.1.

Structurei

3D structure databases

ProteinModelPortaliQ53NI2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni319 – 36446Calmodulin-bindingBy similarityAdd
BLAST

Sequence similaritiesi

Belongs to the NAD kinase family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG2178. Eukaryota.
COG0061. LUCA.
HOGENOMiHOG000029602.
InParanoidiQ53NI2.
KOiK00858.
OMAiRSKKVYP.

Family and domain databases

Gene3Di2.60.200.30. 1 hit.
3.40.50.10330. 1 hit.
3.90.190.10. 1 hit.
HAMAPiMF_00361. NAD_kinase.
InterProiIPR017438. ATP-NAD_kinase_dom_1.
IPR017437. ATP-NAD_kinase_PpnK-typ_all-b.
IPR016064. NAD/diacylglycerol_kinase.
IPR002504. NADK.
IPR029021. Prot-tyrosine_phosphatase-like.
[Graphical view]
PANTHERiPTHR20275. PTHR20275. 2 hits.
PfamiPF01513. NAD_kinase. 1 hit.
[Graphical view]
SUPFAMiSSF111331. SSF111331. 1 hit.
SSF52799. SSF52799. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q53NI2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAVCARHGP AKLPPPPPPL AGERAAAWVV GRWWWRPAAA GRRGVVAARA
60 70 80 90 100
SFFSSRIGLD SQNYHTRDLS QLLWVGPVPG DIAEIEAYCR IFRAAEQLHT
110 120 130 140 150
AVMSALCDPE TGECPVRYDV QTEDLPVLED KVAAVLGCML ALLNRGRKEV
160 170 180 190 200
LSGRSGVASA FQGSEDSTMD KIPPLALFRG DLKRCCESMQ VALASYLVPS
210 220 230 240 250
EARGLDIWRK LQRLKNACYD AGFPRADGHP CPTLFANWFP VYFSTVPDDS
260 270 280 290 300
LSDELEVAFW RGGQVSEEGL EWLLLKGFKT IVDLREEDVK DDLYLSAIHE
310 320 330 340 350
AVSLGKIEVV NLPVEIGTAP SAEQVQRFAE IVSDSAKKPI YLHSQEGISR
360 370 380 390 400
TSAMVSRWKQ YVTRAERLAT QNRSLNGNGK HVRNDQTEQL TNSPGFSSEG
410 420 430 440 450
SENGTPLESD RTMEGETCDI DIETARHNLE ITNSLPSEQS TEQGELHGTR
460 470 480 490 500
TELQSNFRLE SNPLKAQFPS CDVFSKKGMT DFFRSKKVYP KSVLNPRRRS
510 520 530 540 550
NSLLVSRRKQ SLSAEQNGAI DYEAAEFKVL KSSNGASFDN DYILSVASGI
560 570 580 590 600
TNGKPSNNGA STSVEDREME TSVVTVDPRT SDTSNSNGNA PLGSQKSAER
610 620 630 640 650
NGSLYVEREK SDHVDGNMCA SATGVVRLQS RRKAEMFLVR TDGFSCTREK
660 670 680 690 700
VTESSLAFTH PSTQQQMLMW KSPPKTVLLL KKLGDELMEE AKEVASFLHH
710 720 730 740 750
QEKMNVLVEP DVHDIFARIP GYGFVQTFYT QDTSDLHERV DFVACLGGDG
760 770 780 790 800
VILHASNLFR TSVPPVVSFN LGSLGFLTSH NFEGFRQDLR AVIHGNNTLG
810 820 830 840 850
VYITLRMRLR CEIFRNGKAM PGKVFDVLNE VVVDRGSNPY LSKIECYEHN
860 870 880 890 900
HLITKVQGDG VIVATPTGST AYSTAAGGSM VHPNVPCMLF TPICPHSLSF
910 920 930 940 950
RPVILPDSAR LELKIPDDAR SNAWVSFDGK RRQQLSRGDS VQISMSQHPL
960 970 980
PTVNKSDQTG DWFRSLIRCL NWNERLDQKA L
Length:981
Mass (Da):108,613
Last modified:May 24, 2005 - v1
Checksum:i18DECA59F458B6B6
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti610 – 6101K → R in AK065215 (PubMed:12869764).Curated
Sequence conflicti809 – 8091L → V in AK065215 (PubMed:12869764).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134046 Genomic DNA. Translation: AAX95220.1.
DP000010 Genomic DNA. Translation: ABA91849.1.
AP008217 Genomic DNA. Translation: BAF27778.1.
AP014967 Genomic DNA. Translation: BAT13017.1.
AK065215 mRNA. No translation available.
RefSeqiXP_015616979.1. XM_015761493.1.
UniGeneiOs.87857.

Genome annotation databases

EnsemblPlantsiOS11T0191400-01; OS11T0191400-01; OS11G0191400.
GeneIDi4349979.
GrameneiOS11T0191400-01; OS11T0191400-01; OS11G0191400.
KEGGiosa:4349979.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134046 Genomic DNA. Translation: AAX95220.1.
DP000010 Genomic DNA. Translation: ABA91849.1.
AP008217 Genomic DNA. Translation: BAF27778.1.
AP014967 Genomic DNA. Translation: BAT13017.1.
AK065215 mRNA. No translation available.
RefSeqiXP_015616979.1. XM_015761493.1.
UniGeneiOs.87857.

3D structure databases

ProteinModelPortaliQ53NI2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os11g08670.1.

Proteomic databases

PaxDbiQ53NI2.
PRIDEiQ53NI2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS11T0191400-01; OS11T0191400-01; OS11G0191400.
GeneIDi4349979.
GrameneiOS11T0191400-01; OS11T0191400-01; OS11G0191400.
KEGGiosa:4349979.

Phylogenomic databases

eggNOGiKOG2178. Eukaryota.
COG0061. LUCA.
HOGENOMiHOG000029602.
InParanoidiQ53NI2.
KOiK00858.
OMAiRSKKVYP.

Gene expression databases

ExpressionAtlasiQ53NI2. baseline and differential.
GenevisibleiQ53NI2. OS.

Family and domain databases

Gene3Di2.60.200.30. 1 hit.
3.40.50.10330. 1 hit.
3.90.190.10. 1 hit.
HAMAPiMF_00361. NAD_kinase.
InterProiIPR017438. ATP-NAD_kinase_dom_1.
IPR017437. ATP-NAD_kinase_PpnK-typ_all-b.
IPR016064. NAD/diacylglycerol_kinase.
IPR002504. NADK.
IPR029021. Prot-tyrosine_phosphatase-like.
[Graphical view]
PANTHERiPTHR20275. PTHR20275. 2 hits.
PfamiPF01513. NAD_kinase. 1 hit.
[Graphical view]
SUPFAMiSSF111331. SSF111331. 1 hit.
SSF52799. SSF52799. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiNADK2_ORYSJ
AccessioniPrimary (citable) accession number: Q53NI2
Secondary accession number(s): Q0IU37
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 2, 2006
Last sequence update: May 24, 2005
Last modified: May 11, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.