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Protein

Putative auxin transporter-like protein 4

Gene

Os11g0169200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Carrier protein involved in proton-driven auxin influx. May mediate the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processAmino-acid transport, Auxin signaling pathway, Symport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Putative auxin transporter-like protein 4
Gene namesi
Ordered Locus Names:Os11g0169200, LOC_Os11g06820
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 66CytoplasmicSequence analysisAdd BLAST66
Transmembranei67 – 84HelicalSequence analysisAdd BLAST18
Topological domaini85 – 86ExtracellularSequence analysis2
Transmembranei87 – 107HelicalSequence analysisAdd BLAST21
Topological domaini108 – 143CytoplasmicSequence analysisAdd BLAST36
Transmembranei144 – 164HelicalSequence analysisAdd BLAST21
Topological domaini165 – 179ExtracellularSequence analysisAdd BLAST15
Transmembranei180 – 200HelicalSequence analysisAdd BLAST21
Topological domaini201 – 203CytoplasmicSequence analysis3
Transmembranei204 – 224HelicalSequence analysisAdd BLAST21
Topological domaini225 – 241ExtracellularSequence analysisAdd BLAST17
Transmembranei242 – 262HelicalSequence analysisAdd BLAST21
Topological domaini263 – 275CytoplasmicSequence analysisAdd BLAST13
Transmembranei276 – 296HelicalSequence analysisAdd BLAST21
Topological domaini297 – 323ExtracellularSequence analysisAdd BLAST27
Transmembranei324 – 344HelicalSequence analysisAdd BLAST21
Topological domaini345 – 365CytoplasmicSequence analysisAdd BLAST21
Transmembranei366 – 386HelicalSequence analysisAdd BLAST21
Topological domaini387ExtracellularSequence analysis1
Transmembranei388 – 408HelicalSequence analysisAdd BLAST21
Topological domaini409 – 433CytoplasmicSequence analysisAdd BLAST25
Transmembranei434 – 454HelicalSequence analysisAdd BLAST21
Topological domaini455 – 480ExtracellularSequence analysisAdd BLAST26

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000938531 – 480Putative auxin transporter-like protein 4Add BLAST480

Proteomic databases

PaxDbiQ53JG7.
PRIDEiQ53JG7.

Expressioni

Gene expression databases

GenevisibleiQ53JG7. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os11g06820.1.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1303. Eukaryota.
COG0814. LUCA.
HOGENOMiHOG000238482.
InParanoidiQ53JG7.
KOiK13946.
OMAiKVDFRGH.
OrthoDBiEOG09360AGA.

Family and domain databases

InterProiView protein in InterPro
IPR013057. AA_transpt_TM.
PfamiView protein in Pfam
PF01490. Aa_trans. 1 hit.

Sequencei

Sequence statusi: Complete.

Q53JG7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEKVETIV AGNYVEMERE GAATAGEGVG GAAAASGRRR GKLAVSSLFW
60 70 80 90 100
HGGSVYDAWF SCASNQVAQV LLTLPYSFSQ LGMASGVAFQ VFYGLMGSWT
110 120 130 140 150
AYLISVLYVE YRTRRERDKV DFRNHVIQWF EVLDGLLGRH WRNAGLLFNC
160 170 180 190 200
TFLLFGSVIQ LIACASNIYY INDRLDKRTW TYIFGACCAT TVFVPSFHNY
210 220 230 240 250
RVWSFLGLLM TSYTAWYLTV AAVVHGKVDG AAPRAGPSKT MVLYFTGATN
260 270 280 290 300
ILYTFGGHAV TVEIMHAMWR PRRFKMIYLA ATAYVLTLTL PSAAAMYWAF
310 320 330 340 350
GDALLDHSNA FALLPRTPWR DAAVVLMLIH QFITFGFACT PLYFVWEKAI
360 370 380 390 400
GVHGGAGVLR RAAARLPVVL PIWFLAVIFP FFGPINSTVG SFLVSFTVYI
410 420 430 440 450
IPAMAHMATF APAAARENAV EPPPRALGGW PGTFAANCFV VAWVLVVGFG
460 470 480
FGGWASTVNF VRQVDTFGLF TKCYQCPPRH
Length:480
Mass (Da):52,957
Last modified:May 24, 2005 - v1
Checksum:iD31A942D80DA2B3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC147812 Genomic DNA. Translation: AAX93011.1.
DP000010 Genomic DNA. Translation: ABA91603.1.
AP008217 Genomic DNA. Translation: BAF27695.1.
AP014967 Genomic DNA. Translation: BAT12849.1.
RefSeqiXP_015617575.1. XM_015762089.1.

Genome annotation databases

EnsemblPlantsiOS11T0169200-00; OS11T0169200-00; OS11G0169200.
GeneIDi4349885.
GrameneiOS11T0169200-00; OS11T0169200-00; OS11G0169200.
KEGGiosa:4349885.

Similar proteinsi

Entry informationi

Entry nameiLAX14_ORYSJ
AccessioniPrimary (citable) accession number: Q53JG7
Secondary accession number(s): A0A0P0XZ88, Q2RA22
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 10, 2006
Last sequence update: May 24, 2005
Last modified: October 25, 2017
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families