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Q53I03

- Q53I03_9GAMM

UniProt

Q53I03 - Q53I03_9GAMM

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Protein
Submitted name:

DNA gyrase subunit B

Gene

gyrB

Organism
Aeromonas tecta
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA topoisomerase type II (ATP-hydrolyzing) activity Source: InterPro

GO - Biological processi

  1. DNA topological change Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Isomerase, TopoisomeraseUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
DNA gyrase subunit BImported
Gene namesi
Name:gyrBImported
OrganismiAeromonas tectaImported
Taxonomic identifieri324617 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

Structurei

3D structure databases

ProteinModelPortaliQ53I03.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the type II topoisomerase family.UniRule annotation

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
3.30.565.10. 1 hit.
3.40.50.670. 1 hit.
InterProiIPR003594. HATPase_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013506. Topo_IIA_bsu_dom2.
IPR013759. Topo_IIA_cen_dom.
IPR013760. Topo_IIA_like_dom.
IPR018522. TopoIIA_CS.
IPR006171. Toprim_domain.
[Graphical view]
PfamiPF00204. DNA_gyraseB. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
SMARTiSM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55874. SSF55874. 1 hit.
SSF56719. SSF56719. 1 hit.
PROSITEiPS00177. TOPOISOMERASE_II. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q53I03-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
HGVGVSVVNA LSDKLLLTIR RNGHVYEQTY HLGEPQAPLK QIGDSSSGTG
60 70 80 90 100
TEVRFWPSPT IFSDTLYHYE ILAKRLRELS FLNSGVSIRL QDERDGREVH
110 120 130 140 150
FCYEGGIKAF VEYLNQNKTP IHPKVFHFST EQDGIGVEVA MQWNDAYQEG
160 170 180 190 200
VYCFTNNIPQ RDGGTHLVGF RTALTRTLNT YMDKEDYSKK AKSAASGDDV
210 220 230 240 250
REGLIAVISV KVPDPKFSSQ TKDKLVSSEV KTAVEQAMGE KLGEFLLENP
260 270 280 290 300
GDAKIVVNKI IDAARAREAA RKARELTRRK GALDIAGLPG KLADCQEKDP
310 320 330 340 350
ALSELYIVEG DSAGGSAKQG RNRKNQAILP LKGKILNVEK ARFDKMISSQ
360 370
EVGTLITALG CGIGRDEYNP DK
Length:372
Mass (Da):41,015
Last modified:May 24, 2005 - v1
Checksum:iA83A969A94D2A7D0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei372 – 3721Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ964952 Genomic DNA. Translation: CAI79641.1.
AJ964953 Genomic DNA. Translation: CAI79642.1.
AJ964954 Genomic DNA. Translation: CAI79643.1.
AJ964955 Genomic DNA. Translation: CAI79644.1.
AJ964956 Genomic DNA. Translation: CAI79645.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ964952 Genomic DNA. Translation: CAI79641.1 .
AJ964953 Genomic DNA. Translation: CAI79642.1 .
AJ964954 Genomic DNA. Translation: CAI79643.1 .
AJ964955 Genomic DNA. Translation: CAI79644.1 .
AJ964956 Genomic DNA. Translation: CAI79645.1 .

3D structure databases

ProteinModelPortali Q53I03.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 3.30.230.10. 1 hit.
3.30.565.10. 1 hit.
3.40.50.670. 1 hit.
InterProi IPR003594. HATPase_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013506. Topo_IIA_bsu_dom2.
IPR013759. Topo_IIA_cen_dom.
IPR013760. Topo_IIA_like_dom.
IPR018522. TopoIIA_CS.
IPR006171. Toprim_domain.
[Graphical view ]
Pfami PF00204. DNA_gyraseB. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view ]
SMARTi SM00433. TOP2c. 1 hit.
[Graphical view ]
SUPFAMi SSF54211. SSF54211. 1 hit.
SSF55874. SSF55874. 1 hit.
SSF56719. SSF56719. 1 hit.
PROSITEi PS00177. TOPOISOMERASE_II. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Aeromonas tecta sp. nov., isolated from clinical and environmental sources."
    Demarta A., Kuepfer M., Riegel P., Harf-Monteil C., Tonolla M., Peduzzi R.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Aer106Imported, Aer58Imported, F581AImported, F713GImported and Type strain: F518Imported.

Entry informationi

Entry nameiQ53I03_9GAMM
AccessioniPrimary (citable) accession number: Q53I03
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)