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Q53I03 (Q53I03_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gyrB EMBL CAI79642.1
OrganismAeromonas tecta EMBL CAI79642.1
Taxonomic identifier324617 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

Protein attributes

Sequence length372 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAI79642.1
Non-terminal residue3721 EMBL CAI79642.1

Sequences

Sequence LengthMass (Da)Tools
Q53I03 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: A83A969A94D2A7D0

FASTA37241,015
        10         20         30         40         50         60 
HGVGVSVVNA LSDKLLLTIR RNGHVYEQTY HLGEPQAPLK QIGDSSSGTG TEVRFWPSPT 

        70         80         90        100        110        120 
IFSDTLYHYE ILAKRLRELS FLNSGVSIRL QDERDGREVH FCYEGGIKAF VEYLNQNKTP 

       130        140        150        160        170        180 
IHPKVFHFST EQDGIGVEVA MQWNDAYQEG VYCFTNNIPQ RDGGTHLVGF RTALTRTLNT 

       190        200        210        220        230        240 
YMDKEDYSKK AKSAASGDDV REGLIAVISV KVPDPKFSSQ TKDKLVSSEV KTAVEQAMGE 

       250        260        270        280        290        300 
KLGEFLLENP GDAKIVVNKI IDAARAREAA RKARELTRRK GALDIAGLPG KLADCQEKDP 

       310        320        330        340        350        360 
ALSELYIVEG DSAGGSAKQG RNRKNQAILP LKGKILNVEK ARFDKMISSQ EVGTLITALG 

       370 
CGIGRDEYNP DK 

« Hide

References

[1]"Aeromonas tecta sp. nov., isolated from clinical and environmental sources."
Demarta A., Kuepfer M., Riegel P., Harf-Monteil C., Tonolla M., Peduzzi R.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Aer106 EMBL CAI79643.1, Aer58 EMBL CAI79644.1, F581A EMBL CAI79645.1, F713G EMBL CAI79642.1 and Type strain: F518 EMBL CAI79641.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ964952 Genomic DNA. Translation: CAI79641.1.
AJ964953 Genomic DNA. Translation: CAI79642.1.
AJ964954 Genomic DNA. Translation: CAI79643.1.
AJ964955 Genomic DNA. Translation: CAI79644.1.
AJ964956 Genomic DNA. Translation: CAI79645.1.

3D structure databases

ProteinModelPortalQ53I03.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.30.230.10. 1 hit.
3.30.565.10. 1 hit.
3.40.50.670. 1 hit.
InterProIPR003594. HATPase_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013506. Topo_IIA_bsu_dom2.
IPR013759. Topo_IIA_cen_dom.
IPR013760. Topo_IIA_like_dom.
IPR018522. TopoIIA_CS.
IPR006171. Toprim_domain.
[Graphical view]
PfamPF00204. DNA_gyraseB. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
SMARTSM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF54211. SSF54211. 1 hit.
SSF55874. SSF55874. 1 hit.
SSF56719. SSF56719. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ53I03_9GAMM
AccessionPrimary (citable) accession number: Q53I03
Entry history
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: May 14, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)