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Q53I03

- Q53I03_9GAMM

UniProt

Q53I03 - Q53I03_9GAMM

Protein
Submitted name:

DNA gyrase subunit B

Gene

gyrB

Organism
Aeromonas tecta
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (24 May 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA topoisomerase type II (ATP-hydrolyzing) activity Source: InterPro

    GO - Biological processi

    1. DNA topological change Source: InterPro

    Keywords - Molecular functioni

    Isomerase, TopoisomeraseUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA gyrase subunit BImported
    Gene namesi
    Name:gyrBImported
    OrganismiAeromonas tectaImported
    Taxonomic identifieri324617 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

    Structurei

    3D structure databases

    ProteinModelPortaliQ53I03.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the type II topoisomerase family.UniRule annotation

    Family and domain databases

    Gene3Di3.30.230.10. 1 hit.
    3.30.565.10. 1 hit.
    3.40.50.670. 1 hit.
    InterProiIPR003594. HATPase_ATP-bd.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR001241. Topo_IIA.
    IPR013506. Topo_IIA_bsu_dom2.
    IPR013759. Topo_IIA_cen_dom.
    IPR013760. Topo_IIA_like_dom.
    IPR018522. TopoIIA_CS.
    IPR006171. Toprim_domain.
    [Graphical view]
    PfamiPF00204. DNA_gyraseB. 1 hit.
    PF01751. Toprim. 1 hit.
    [Graphical view]
    SMARTiSM00433. TOP2c. 1 hit.
    [Graphical view]
    SUPFAMiSSF54211. SSF54211. 1 hit.
    SSF55874. SSF55874. 1 hit.
    SSF56719. SSF56719. 1 hit.
    PROSITEiPS00177. TOPOISOMERASE_II. 1 hit.
    PS50880. TOPRIM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q53I03-1 [UniParc]FASTAAdd to Basket

    « Hide

    HGVGVSVVNA LSDKLLLTIR RNGHVYEQTY HLGEPQAPLK QIGDSSSGTG    50
    TEVRFWPSPT IFSDTLYHYE ILAKRLRELS FLNSGVSIRL QDERDGREVH 100
    FCYEGGIKAF VEYLNQNKTP IHPKVFHFST EQDGIGVEVA MQWNDAYQEG 150
    VYCFTNNIPQ RDGGTHLVGF RTALTRTLNT YMDKEDYSKK AKSAASGDDV 200
    REGLIAVISV KVPDPKFSSQ TKDKLVSSEV KTAVEQAMGE KLGEFLLENP 250
    GDAKIVVNKI IDAARAREAA RKARELTRRK GALDIAGLPG KLADCQEKDP 300
    ALSELYIVEG DSAGGSAKQG RNRKNQAILP LKGKILNVEK ARFDKMISSQ 350
    EVGTLITALG CGIGRDEYNP DK 372
    Length:372
    Mass (Da):41,015
    Last modified:May 24, 2005 - v1
    Checksum:iA83A969A94D2A7D0
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei372 – 3721Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ964952 Genomic DNA. Translation: CAI79641.1.
    AJ964953 Genomic DNA. Translation: CAI79642.1.
    AJ964954 Genomic DNA. Translation: CAI79643.1.
    AJ964955 Genomic DNA. Translation: CAI79644.1.
    AJ964956 Genomic DNA. Translation: CAI79645.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ964952 Genomic DNA. Translation: CAI79641.1 .
    AJ964953 Genomic DNA. Translation: CAI79642.1 .
    AJ964954 Genomic DNA. Translation: CAI79643.1 .
    AJ964955 Genomic DNA. Translation: CAI79644.1 .
    AJ964956 Genomic DNA. Translation: CAI79645.1 .

    3D structure databases

    ProteinModelPortali Q53I03.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.30.230.10. 1 hit.
    3.30.565.10. 1 hit.
    3.40.50.670. 1 hit.
    InterProi IPR003594. HATPase_ATP-bd.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR001241. Topo_IIA.
    IPR013506. Topo_IIA_bsu_dom2.
    IPR013759. Topo_IIA_cen_dom.
    IPR013760. Topo_IIA_like_dom.
    IPR018522. TopoIIA_CS.
    IPR006171. Toprim_domain.
    [Graphical view ]
    Pfami PF00204. DNA_gyraseB. 1 hit.
    PF01751. Toprim. 1 hit.
    [Graphical view ]
    SMARTi SM00433. TOP2c. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54211. SSF54211. 1 hit.
    SSF55874. SSF55874. 1 hit.
    SSF56719. SSF56719. 1 hit.
    PROSITEi PS00177. TOPOISOMERASE_II. 1 hit.
    PS50880. TOPRIM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Aeromonas tecta sp. nov., isolated from clinical and environmental sources."
      Demarta A., Kuepfer M., Riegel P., Harf-Monteil C., Tonolla M., Peduzzi R.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Aer106Imported, Aer58Imported, F581AImported, F713GImported and Type strain: F518Imported.

    Entry informationi

    Entry nameiQ53I03_9GAMM
    AccessioniPrimary (citable) accession number: Q53I03
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 24, 2005
    Last sequence update: May 24, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)