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Q53HW5

- Q53HW5_HUMAN

UniProt

Q53HW5 - Q53HW5_HUMAN

Protein
Submitted name:

Excision repair cross-complementing rodent repair deficiency, complementation group 3 variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (24 May 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. ATP-dependent DNA helicase activity Source: InterPro
    3. DNA binding Source: InterPro

    GO - Biological processi

    1. nucleotide-excision repair Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Excision repair cross-complementing rodent repair deficiency, complementation group 3 variantImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PRIDEiQ53HW5.

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG051499.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR006935. Helicase/UvrB_dom.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR001161. Helicase_Ercc3.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00271. Helicase_C. 1 hit.
    PF04851. ResIII. 1 hit.
    [Graphical view]
    PRINTSiPR00851. XRODRMPGMNTB.
    SMARTiSM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 3 hits.
    TIGRFAMsiTIGR00603. rad25. 1 hit.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q53HW5-1 [UniParc]FASTAAdd to Basket

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    MGKRDRADRD KKKSRKRHYE DEEDDEEDAP GNDPQEAVPS AAGKQVDESG    50
    TKVDEYGAKD YRLQMPLKDD HTSRPLWVAP DGHIFLEAFS PVYKYAQDFL 100
    VAIAEPVCRP THVHEYKLTA YSLYAAVSVG LQTSDITEYL RKLSKTGVPD 150
    GIMQFIKLCT VSYGKVKLVL KHNRYFVESC HPDVIQHLLQ DPVIRECRLR 200
    NSEGEATELI TETFTSKSAI PKTAESSGGP STSRVTDPQG KSDIPMDLFD 250
    FYEQMDKDEE EEEETQTVSF EVKQEMIEEL QKRCIHLEYP LLAEYDFRND 300
    SVNPDINIDL KPTAVLRPYQ EKSLRKMFGN GRARSGVIVL PCGAGKSLVG 350
    VTAACTVRKR CLVLGNSAVS VEQWKAQFKM WSTIDDSQIC RFTSDAKDKP 400
    IGCSVAISTY SMLGHTTKRS WEAERVMEWL KTQVWGLMIL DEVHTIPAKM 450
    FRRVLTIVQA HCKLGLTATL VREDDKIVDL NFLIGPKLYE ANWMELQNNG 500
    YIAKVQCAEV WCPMSPEFYR EYVAIKTKKR ILLYTMNPNK FRACQFLIKF 550
    HERRNDKIIV FADNVFALKE YAIRLNKSYI YGPTSQGERM QILQNFKHNP 600
    KINTIFISKV GDTSFDLPEA NVLIQISSHG GSRRQEAQRL GRVLRAKKGM 650
    VAEEYNAFFY SLVSQDTQEM AYSTKRQGFL VDQGYSFKVI TKLAGMEEED 700
    LAFSTKEEQQ QLLQKVLAAT DLDAEEEVVA GEFGSRSSQA SRRFGTMSSM 750
    SGADDTVYME YHSSRSKAPS KHVHPLFKRF RK 782
    Length:782
    Mass (Da):89,149
    Last modified:May 24, 2005 - v1
    Checksum:i8789BBFD5E1F4B6E
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK222465 mRNA. Translation: BAD96185.1.
    UniGeneiHs.469872.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK222465 mRNA. Translation: BAD96185.1 .
    UniGenei Hs.469872.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q53HW5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOVERGENi HBG051499.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR006935. Helicase/UvrB_dom.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR001161. Helicase_Ercc3.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00271. Helicase_C. 1 hit.
    PF04851. ResIII. 1 hit.
    [Graphical view ]
    PRINTSi PR00851. XRODRMPGMNTB.
    SMARTi SM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 3 hits.
    TIGRFAMsi TIGR00603. rad25. 1 hit.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides."
      Maruyama K., Sugano S.
      Gene 138:171-174(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Adipose tissueImported.
    2. "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library."
      Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S.
      Gene 200:149-156(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Adipose tissueImported.
    3. Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Adipose tissueImported.

    Entry informationi

    Entry nameiQ53HW5_HUMAN
    AccessioniPrimary (citable) accession number: Q53HW5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 24, 2005
    Last sequence update: May 24, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.