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Unreviewed, UniProtKB/TrEMBL Q53HR2 (Q53HR2_HUMAN)

Last modified January 19, 2010. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Acyl-Coenzyme A dehydrogenase, very long chain variant EMBL BAD96238.1
OrganismHomo sapiens (Human) EMBL BAD96238.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length655 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD96238.1

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Sequences

Sequence LengthMass (Da)Tools
Q53HR2-1 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: A55DB88A979B3B60

FASTA65570,418
        10         20         30         40         50         60 
MQAARMAASL GRQLLRLGGG SSRLTALLGQ PRPGPARRPY AGGAAQLALD KSDSHPSDAL 

        70         80         90        100        110        120 
TRKKPAKAES KSFAVGMFKG QLTTDQVFPY PSVLNEEQTQ FLKELVEPVS RFFEEVNDPA 

       130        140        150        160        170        180 
KNDALEMVEE TTWQGLKELG AFGLQVPSEL GGVGLCNTQY ARLVEIVGMH DLGVGITLGA 

       190        200        210        220        230        240 
HQSIGFKGIL LFGTKAQKEK YLPKLASGET VAAFCLTEPS SGSDAASIRT SAVPSPCGKY 

       250        260        270        280        290        300 
YTLNGSKLWI SNGGLADIFT VFAKTPVTDP ATGAVKEKIT AFVVERGFGG ITHGPPEKKM 

       310        320        330        340        350        360 
GIKASNTAEV FFDGVRVPSE NVLGEVGSGF KVAMHILNNG RFGMAAALAG TMRGIIAKAV 

       370        380        390        400        410        420 
DHATNRTQFG EKIHNFGLIQ ERLARMVMLQ YVTESMAYMV SANMDQGATD FQIEAAISKI 

       430        440        450        460        470        480 
FGSEAAWKVT DECIQIMGGM GFMKEPGVER VLRDLRIFRI FEGTNDILRL FVALQGCMDK 

       490        500        510        520        530        540 
GKELSGLGSA LKNPFGNAGL LLGEAGKQLR RRAGLGSGLS LSGLVHPELS RSGELAVRAL 

       550        560        570        580        590        600 
EQFATVVEAK LIKHKKGIVN EQFLLQRLAD GAIDLYAMVV VLSRASRSLS EGHPTAQHEK 

       610        620        630        640        650 
MLCDTWCIEA AARIREGMAA LQSDPWQQEL YRNFKSISKA LVERGGVVTS NPLGF

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References

[1]"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides."
Maruyama K., Sugano S.
Gene 138:171-174(1994) [PubMed: 8125298] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Adipose tissue EMBL BAD96238.1.
[2]"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library."
Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S.
Gene 200:149-156(1997) [PubMed: 9373149] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Adipose tissue EMBL BAD96238.1.
[3]Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Adipose tissue EMBL BAD96238.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK222518 mRNA. Translation: BAD96238.1.
IPIIPI00028031.
UniGeneHs.437178
Hs.463928

3D structure databases

SMRQ53HR2. Positions 69-655.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ53HR2.

Genome annotation databases

EnsemblENST00000322910; ENSP00000325395; ENSG00000072778; Homo sapiens. [Genome view]
ENST00000356839; ENSP00000349297; ENSG00000072778; Homo sapiens. [Genome view]

Organism-specific databases

HGNCHGNC:92. ACADVL.

Phylogenomic databases

HOVERGENQ53HR2.

Gene expression databases

ArrayExpressQ53HR2.
BgeeQ53HR2.

Family and domain databases

InterProIPR006089. Acyl-CoA_DH_CS.
IPR006092. Acyl-CoA_DH_N.
IPR006090. Acyl-CoA_Oxase/DH_1.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase.
IPR013764. AcylCoA_oxidase/DH_1/2_C.
[Graphical view]
Gene3DG3DSA:2.40.110.10. Acyl_CoA_DH/ox_M. 1 hit.
G3DSA:1.10.540.10. AcylCoA_DH/ox_N. 1 hit.
G3DSA:1.20.140.10. AcylCoA_DH_1/2_C. 1 hit.
PfamPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
PROSITEPS00072. ACYL_COA_DH_1. 1 hit.
PS00073. ACYL_COA_DH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ53HR2_HUMAN
AccessionPrimary (citable) accession number: Q53HR2
Entry history
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: January 19, 2010
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information