Q53H36 (Q53H36_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: CDK5 regulatory subunit associated protein 1 isoform a variant EMBL BAD96465.1
Organism	Homo sapiens (Human) EMBL BAD96465.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	586 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	tRNA modification Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro transferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAD96465.1

Sequences

	Sequence		Length	Mass (Da)
	Q53H36 [UniParc]. Last modified May 24, 2005. Version 1. Checksum: 62C970660EE28BD9	FASTA	586	66,017
	10 20 30 40 50 60 MHPLQCVLQV QRSLGWGPLA SVSWLSLRMC RAHSSLSSTM CPSPERQEDG ARKDFSSRLA 70 80 90 100 110 120 AGPTFQHFLK SASAPQEKLS SEVEDPPPYL MMDELLGRQR KVYLETYGCQ MNVNDTEIAW 130 140 150 160 170 180 SILQKSGYLR TSNLQEADVI LLVTCSIREK AEQTIWNRLH QLKALKTRRP RSRVPLRIGI 190 200 210 220 230 240 LGCMAERLKE EILNREKMVD ILAGPDAYRD LPRLLAVAES GQQAANVLLS LDETYADVMP 250 260 270 280 290 300 VQTSASATSA FVSIMRGCDN MCSYCIVPFT RGRERSRPIA SILEEVKKLS EQGLKEVTLL 310 320 330 340 350 360 GQNVNSFRDN SEVQFNSAVP TNLSRGFTTN YKTKQGGLRF AHLLDQVSRV DPEMRIRFTS 370 380 390 400 410 420 PHPKDFPDEV LQLIHERDNI CKQIHLPAQS GSSRVLEAMR RGYSREAYVE LVHHIRESIP 430 440 450 460 470 480 GVSLSSDFIA GFCGETEEDH VQTVSLLREV QYNMGFLFAY SMRQTRAYHR LKDDVPEEVK 490 500 510 520 530 540 LRRLEELITI FREEATKANQ TSVGCTQLVL VEGLSKRSAT DLCGRNDGNL KVIFPDAEME 550 560 570 580 DVNNPGLRVR AQPGDYVLVK ITSASSQTLR GHVLCRTTLR DSSAYC

References

[1]	"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides." Maruyama K., Sugano S. Gene 138:171-174(1994) [PubMed: 8125298] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Dermoid cancer EMBL BAD96465.1.
[2]	"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library." Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S. Gene 200:149-156(1997) [PubMed: 9373149] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Dermoid cancer EMBL BAD96465.1.
[3]	Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Dermoid cancer EMBL BAD96465.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK222745 mRNA. Translation: BAD96465.1.
IPI	IPI00328278.
UniGene	Hs.435952.
3D structure databases
ProteinModelPortal	Q53H36.
ModBase	Search...
Protein-protein interaction databases
STRING	Q53H36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	uc002wza.1. human.
Phylogenomic databases
eggNOG	prNOG13200.
HOVERGEN	HBG050975.
Gene expression databases
ArrayExpress	Q53H36.
Bgee	Q53H36.
Family and domain databases
HAMAP	MF_01864. tRNA_metthiotr_MiaB. [Tree]
InterPro	IPR006638. Elp3/MiaB/NifB. IPR023970. MeThioTfrase/B12-bd/rSAM. IPR005839. Methylthiotransferase. IPR020612. Methylthiotransferase_CS. IPR013848. Methylthiotransferase_N. IPR006463. MiaB_methiolase. IPR007197. rSAM. IPR023404. rSAM_horseshoe. IPR002792. TRAM. [Graphical view]
Gene3D	G3DSA:3.80.30.20. G3DSA:3.80.30.20. 1 hit.
PANTHER	PTHR11918. UPF0004. 1 hit.
Pfam	PF04055. Radical_SAM. 1 hit. PF01938. TRAM. 1 hit. PF00919. UPF0004. 1 hit. [Graphical view]
SMART	SM00729. Elp3. 1 hit. [Graphical view]
TIGRFAMs	TIGR01574. MiaB-methiolase. 1 hit. TIGR00089. TIGR00089. 1 hit.
PROSITE	PS51449. MTTASE_N. 1 hit. PS01278. MTTASE_RADICAL. 1 hit. PS50926. TRAM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q53H36_HUMAN

Accession

Primary (citable) accession number: Q53H36

Entry history

Integrated into UniProtKB/TrEMBL:	May 24, 2005
Last sequence update:	May 24, 2005
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.