Unreviewed, UniProtKB/TrEMBL Q53H10 (Q53H10_HUMAN)

Names and origin

Protein names	Submitted name:     Postreplication repair protein hRAD18p variant EMBL BAD96491.1
Organism	Homo sapiens (Human) EMBL BAD96491.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	495 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 SAP domain. Spearmint SPM003034

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353V2
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Biological process	DNA repair Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAD96491.1

Sequences

	Sequence		Length	Mass (Da)
	Q53H10-1 [UniParc]. Last modified May 24, 2005. Version 1. Checksum: 15771D9BEB938998	FASTA	495	56,276
	10 20 30 40 50 60 MDSLAESRWP PGLAVMKTID DLLRCGICFE YFNIAMIIPQ CSHNYCSLCI RKFLSYKTQC 70 80 90 100 110 120 PTCCVTVTEP DLKNNRILDE LVKSLNFARN HLLQFALESP ARSPASSSSK NLAVKVYTPV 130 140 150 160 170 180 ASRQSLKQGS RLMDNFLIRE MSGSTSELLI KENKSKFSPQ KEASPAAKTK ETRSVEEIAP 190 200 210 220 230 240 DPSEAKRPEP PSTSTLKQVT KVDCPVCGVN IPESHINKHL DSCLSREEKK ESLRSSVHKR 250 260 270 280 290 300 KPLPKTVYNL LSDRDLKKKL KEHGLSIQGN KQQLIKRHQE FVHMYNAQRD ALHPKSAAEI 310 320 330 340 350 360 VQEIENIEKT RMRLEASKLN ESVMVFTKDQ TEKEIDEIHS KYRKKHKSEF QLLVDQARKG 370 380 390 400 410 420 YKKIAGMSQK TVTITKEDES TEKLSSVCMG QEDNMTSVTN HFSQSKLDSP EELEPDREED 430 440 450 460 470 480 SSSCIDIQEV LSSSESDSCN SSSSDIIRDL LEEEEAWEAS HKNDLQDTEI SPRQNRRTRA 490 AESAEIEPRN KRNRN

References

[1]	"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides." Maruyama K., Sugano S. Gene 138:171-174(1994) [PubMed: 8125298] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Liver EMBL BAD96491.1.
[2]	"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library." Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S. Gene 200:149-156(1997) [PubMed: 9373149] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Liver EMBL BAD96491.1.
[3]	Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Liver EMBL BAD96491.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AK222771 mRNA. Translation: BAD96491.1.
IPI	IPI00024579.
UniGene	Hs.375684
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000070950. Homo sapiens. [Contig view]
Organism-specific databases
HGNC	HGNC:18278. RAD18.
Phylogenomic databases
HOVERGEN	Q53H10.
Gene expression databases
ArrayExpress	Q53H10.
Bgee	Q53H10.
Family and domain databases
InterPro	IPR003034. SAP_DNA_bd. IPR018957. Znf_C3HC4_RING-type. IPR006642. Znf_Rad18_put. IPR001841. Znf_RING. IPR017907. Znf_RING_CS. [Graphical view]
Pfam	PF02037. SAP. 1 hit. PF00097. zf-C3HC4. 1 hit. [Graphical view]
SMART	SM00184. RING. 1 hit. SM00513. SAP. 1 hit. SM00734. ZnF_Rad18. 1 hit. [Graphical view]
PROSITE	PS50800. SAP. 1 hit. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q53H10_HUMAN

Accession

Primary (citable) accession number: Q53H10

Entry history

Integrated into UniProtKB/TrEMBL:	May 24, 2005
Last sequence update:	May 24, 2005
Last modified:	May 5, 2009
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)