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Unreviewed, UniProtKB/TrEMBL Q53GF1 (Q53GF1_HUMAN)

Last modified January 19, 2010. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Matrix metalloproteinase 7 preproprotein variant EMBL BAD96700.1
OrganismHomo sapiens (Human) EMBL BAD96700.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length267 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD96700.1

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Sequences

Sequence LengthMass (Da)Tools
Q53GF1-1 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: FFA9FEC757ADD9F9

FASTA26729,598
        10         20         30         40         50         60 
MRLTVLCAVC LLPGSLALPL PQEAGGMSEL QWEQAQDYLK RFYLYDSETK NANSLEAKLK 

        70         80         90        100        110        120 
EMQKFFGLPI TGMLNSHVIE IMQKPRCGVP DVAEYSLFPN SPKWTSKVVT YRIVSYTRDL 

       130        140        150        160        170        180 
PHITVDRLVS KALNMWGKEI PLHFRKVVWG TADIMIGFAR GAHGDSYPFD GPGNTLAHAF 

       190        200        210        220        230        240 
APGTGLGGDA HFDEDERWTD GSSLGINFLC AATHELGHSL GMGHSSDPNA VMYPTYGNGD 

       250        260 
PQNFKLSQDD IKGIQKLYGK RSNSRKK

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References

[1]"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides."
Maruyama K., Sugano S.
Gene 138:171-174(1994) [PubMed: 8125298] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Human small intestine EMBL BAD96700.1.
[2]"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library."
Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S.
Gene 200:149-156(1997) [PubMed: 9373149] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Human small intestine EMBL BAD96700.1.
[3]Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Human small intestine EMBL BAD96700.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK222980 mRNA. Translation: BAD96700.1.
IPIIPI00013400.
UniGeneHs.2256

3D structure databases

SMRQ53GF1. Positions 32-264, 96-266.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ53GF1.

Genome annotation databases

EnsemblENST00000260227; ENSP00000260227; ENSG00000137673; Homo sapiens. [Genome view]

Organism-specific databases

HGNCHGNC:7174. MMP7.

Phylogenomic databases

HOVERGENQ53GF1.

Gene expression databases

ArrayExpressQ53GF1.
BgeeQ53GF1.

Family and domain databases

InterProIPR001818. Pept_M10A_M12B.
IPR006026. Peptidase_M.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PfamPF00413. Peptidase_M10. 1 hit.
PF01471. PG_binding_1. 1 hit.
[Graphical view]
PRINTSPR00138. MATRIXIN.
SMARTSM00235. ZnMc. 1 hit.
[Graphical view]
PROSITEPS00546. CYSTEINE_SWITCH. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ53GF1_HUMAN
AccessionPrimary (citable) accession number: Q53GF1
Entry history
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: January 19, 2010
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information