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Q53FR4 (Q53FR4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAD96938.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length796 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD96938.1

Sequences

Sequence LengthMass (Da)Tools
Q53FR4 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: 4EE3078CF2910DD3

FASTA79691,681
        10         20         30         40         50         60 
MPTTQQSPQD EQEKLLDEAI QAVKVQSFQM KRCLDKNKLM DALKHASNML GELRTSMLSP 

        70         80         90        100        110        120 
KSYYELYMAI SDELHYLEVY LTDEFAKGRK VADLYELVQY AGNIIPRLYL LITVGVVYVK 

       130        140        150        160        170        180 
SFPQSRKDIL KDLVEMCRGV QHPLRGLFLR NYLLQCTRNI LPDEGEPTDE ETTGDISDSM 

       190        200        210        220        230        240 
DFVLLNFAEM NKLWVRMQHQ GHSRDREKRE RERQELRILV GTNLVRLSQL EGVNVERYKQ 

       250        260        270        280        290        300 
IVLTGILEQV VNCRDALAQE YLMECIIQVF PDEFHLQTLN PFLRACAELH QNVNVKNIII 

       310        320        330        340        350        360 
ALIDRLALFA HREDGPGIPA DIKLFDIFSQ QVATVIQSRQ DMPSEDVVSL QVSLINLAMK 

       370        380        390        400        410        420 
CYPDRVDYVD KVLETTVEIF NKLNLEHIAT SSAVSKELTR LLKIPVDTYN NILTVLKLKH 

       430        440        450        460        470        480 
FHPLFEYFDY ESRKSMSCYV LSNVLDYNTE IVSQDQVDSI MNLVSTLIQD QPDQPVEDPD 

       490        500        510        520        530        540 
PEDFADEQSL VGRFIHLLRS EDPDQQYLIS NTARKHFGAG GNQRIRFTLP PLVFAAYQLA 

       550        560        570        580        590        600 
FRYKENSKVD DKWEKKCQKI FSFAHQTISA LIKAELAELP LRLFLQGALA AGEIGFENHE 

       610        620        630        640        650        660 
TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR TQCALAASKL 

       670        680        690        700        710        720 
LKKPDQGRAV STCAHLFWSG RNTDKNGEEL HGGKRVMECL KKALKIANQC MDPSLQVQLF 

       730        740        750        760        770        780 
IEILNRYIYF YEKENDAVTI QVLNQLIQKI REDLPNLESS EETEQINKHF HNTLEHLRLR 

       790 
RESPESEGPI YEGLIL 

« Hide

References

[1]"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides."
Maruyama K., Sugano S.
Gene 138:171-174(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Stomach mucosa EMBL BAD96938.1.
[2]"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library."
Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S.
Gene 200:149-156(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Stomach mucosa EMBL BAD96938.1.
[3]Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Stomach mucosa EMBL BAD96938.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK223218 mRNA. Translation: BAD96938.1.
UniGeneHs.454528.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ53FR4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG054277.

Family and domain databases

InterProIPR016024. ARM-type_fold.
IPR005378. Vps35.
[Graphical view]
PANTHERPTHR11099. PTHR11099. 1 hit.
PfamPF03635. Vps35. 1 hit.
[Graphical view]
PIRSFPIRSF009375. Retromer_Vps35. 1 hit.
SUPFAMSSF48371. SSF48371. 3 hits.
ProtoNetSearch...

Entry information

Entry nameQ53FR4_HUMAN
AccessionPrimary (citable) accession number: Q53FR4
Entry history
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.