Q53FN0 (Q53FN0_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Splicing factor, arginine/serine-rich 2 variant EMBL BAD96972.1
Organism	Homo sapiens (Human) EMBL BAD96972.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	221 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAD96972.1

Sequences

	Sequence		Length	Mass (Da)
	Q53FN0 [UniParc]. Last modified May 24, 2005. Version 1. Checksum: 68047614D35714FA	FASTA	221	25,502
	10 20 30 40 50 60 MSYGRPPPDV EGMTSLKVDN LTYRTSPDTL RRVFEKYGRV GDVYIPRDRY TKESRGFAFV 70 80 90 100 110 120 RFHDKRDAED AMDAMDGAVL DGRELRVQMA RYGRPPDSHH SRRGPPPRRY GGGGYGRRSR 130 140 150 160 170 180 SPRRRRRSRS RSRSRSRSRS RSRYSRSKSR SRTRSRSRST SKSRSARRSK SKSSSVSRSR 190 200 210 220 SRSRSRSRSR SPPPVSKRES KSRLRSKSPP KSPEEEGAVS S

References

[1]	"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides." Maruyama K., Sugano S. Gene 138:171-174(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Stomach mucosa EMBL BAD96972.1.
[2]	"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library." Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S. Gene 200:149-156(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Stomach mucosa EMBL BAD96972.1.
[3]	Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Stomach mucosa EMBL BAD96972.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK223252 mRNA. Translation: BAD96972.1.
IPI	IPI00005978.
RefSeq	NP_001182356.1. NM_001195427.1.
UniGene	Hs.584801.
3D structure databases
ProteinModelPortal	Q53FN0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q53FN0.
Proteomic databases
PRIDE	Q53FN0.
Protocols and materials databases
DNASU	6427.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6427.
KEGG	hsa:6427.
Organism-specific databases
CTD	6427.
Phylogenomic databases
HOGENOM	HOG000276233.
KO	K12891.
Gene expression databases
ArrayExpress	Q53FN0.
Family and domain databases
Gene3D	3.30.70.330. 1 hit.
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. [Graphical view]
Pfam	PF00076. RRM_1. 1 hit. [Graphical view]
SMART	SM00360. RRM. 1 hit. [Graphical view]
PROSITE	PS50102. RRM. 1 hit. [Graphical view]
ProtoNet	Search...
Other
GenomeRNAi	6427.
NextBio	24961.

Entry information

Entry name

Q53FN0_HUMAN

Accession

Primary (citable) accession number: Q53FN0

Entry history

Integrated into UniProtKB/TrEMBL:	May 24, 2005
Last sequence update:	May 24, 2005
Last modified:	April 3, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.