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Protein
Submitted name:

Chromosome 1 open reading frame 48 variant

Gene

C1orf48

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome 1 open reading frame 48 variantImported
Submitted name:
Chromosome 1 open reading frame 48, isoform CRA_aImported
Gene namesi
Name:C1orf48Imported
ORF Names:hCG_39200Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162398188.

Expressioni

Gene expression databases

BgeeiENSG00000117697.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000355944.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IXS8. Eukaryota.
ENOG41125EG. LUCA.
HOVERGENiHBG080948.
KOiK11545.
OMAiIEQGDGF.
OrthoDBiEOG091G0LWG.
PhylomeDBiQ53FM2.

Family and domain databases

InterProiIPR013950. Kinetochore_Mis14.
[Graphical view]
PfamiPF08641. Mis14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q53FM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSPELVVL DPPWDKELAA GTESQALVSA TPREDFRVRC TSKRAVTEML
60 70 80 90 100
QLCGRFVQKL GDALPEEIRE PALRDAQWTF ESAVQENISI NGQAWQEASD
110 120 130 140 150
NCFMDSDIKV LEDQFDEIIV DIATKRKQYP RKILECVIKT IKAKQEILKQ
160 170 180 190 200
YHPVVHPLDL KYDPDPAPHM ENLKCRGETV AKEISEAMKS LPALIEQGEG
210 220 230 240 250
FSQVLRMQPV IHLQRIHQEV FSSCHRKPDA KPENFITQIE TTPTETASRK
260 270 280
TSDMVLKRKQ TKDCPQRKWY PLRPKKINLD T
Length:281
Mass (Da):32,162
Last modified:May 24, 2005 - v1
Checksum:iF9FB4379BAFF2626
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK222996 mRNA. Translation: BAD96716.1.
AK223260 mRNA. Translation: BAD96980.1.
CH471100 Genomic DNA. Translation: EAW93379.1.
CH471100 Genomic DNA. Translation: EAW93380.1.
RefSeqiNP_056286.3. NM_015471.3.
UniGeneiHs.497692.

Genome annotation databases

GeneIDi25936.
KEGGihsa:25936.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK222996 mRNA. Translation: BAD96716.1.
AK223260 mRNA. Translation: BAD96980.1.
CH471100 Genomic DNA. Translation: EAW93379.1.
CH471100 Genomic DNA. Translation: EAW93380.1.
RefSeqiNP_056286.3. NM_015471.3.
UniGeneiHs.497692.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000355944.

Protocols and materials databases

DNASUi25936.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi25936.
KEGGihsa:25936.

Organism-specific databases

CTDi25936.
PharmGKBiPA162398188.

Phylogenomic databases

eggNOGiENOG410IXS8. Eukaryota.
ENOG41125EG. LUCA.
HOVERGENiHBG080948.
KOiK11545.
OMAiIEQGDGF.
OrthoDBiEOG091G0LWG.
PhylomeDBiQ53FM2.

Miscellaneous databases

ChiTaRSiNSL1. human.
GenomeRNAii25936.

Gene expression databases

BgeeiENSG00000117697.

Family and domain databases

InterProiIPR013950. Kinetochore_Mis14.
[Graphical view]
PfamiPF08641. Mis14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ53FM2_HUMAN
AccessioniPrimary (citable) accession number: Q53FM2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: September 7, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.