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Unreviewed, UniProtKB/TrEMBL Q53F80 (Q53F80_HUMAN)

Last modified May 5, 2009. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    BRCA1 associated RING domain 1 variant EMBL BAD97129.1
OrganismHomo sapiens (Human) EMBL BAD97129.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length777 AA.
Sequence statusFragment.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD97129.1

Sequences

Sequence LengthMass (Da)Tools
Q53F80-1 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: 8258990E33CB9341

FASTA77786,496
        10         20         30         40         50         60 
MPDNRQPRNR QPRIRSGNEP RSASAMEPDG RGAWAHSRAA LDRLEKLLRC SRCTNILREP 

        70         80         90        100        110        120 
VCLGGCEHIF CSNCVSDYIG TGCPVCYTPA WIQDLKINRQ LDSMIQLCSK LRNLLHDNEL 

       130        140        150        160        170        180 
SDLKEDKPRK GLFNDAGNKK NSIKMWFSPR SKKVRYVVSK ASVQTQPAIK KDASAQQDSY 

       190        200        210        220        230        240 
EFVSPSPPAD VSERAKKASA RSGKKQKKKT LAEINQKWNL EAEKEDGEFD SKEESKQKLV 

       250        260        270        280        290        300 
SFCSQPSVIS SPQINGEIDL LASGSLTESE CFGSLTEVSL PLAEQIESPD TKSRNEVVTP 

       310        320        330        340        350        360 
EKVCKNYLTS KKSLPLENNG KRGHHNRLSS PISKRCRTSI LSTSGDFVKQ TVPSENIPLP 

       370        380        390        400        410        420 
ECSSPPSCKR KVGGTSGSKN SNMSDEFISL SPGTPPSTLS SSSYRRVMSS PSAMKLLPNM 

       430        440        450        460        470        480 
AVKRNHRGET LLHIASIKGD IPSVEYLLQN GSDPNVKDHA GWTPLHEACN HGHLKVVELL 

       490        500        510        520        530        540 
LQHKALVNTT GYQNDSPLHD AAKNGHVDIV KLLLSYGASR NAVNIFGLRP VDYTDDESMK 

       550        560        570        580        590        600 
SLLLLPEKNE SSSASHCSVM NTGQRRDGPL VLIGSGLSSE QQKMLSGLAV ILKAKKYTEF 

       610        620        630        640        650        660 
DSTVTHVVVP GDAVQSTLKC MLGILNGCWI LKFEWVKACL RRKVCEQEEK YEIPEGPRRS 

       670        680        690        700        710        720 
RLNREQLLPK LFDGCYFYLW GTFKHHPKDN LIKLVTAGGG QILSRKPKPD SDVTQTINTV 

       730        740        750        760        770 
AYHARPDSDQ RFCTQYIIYE DLCNYHPERV RQGKVWKAPS SWFIDCVTSF ELLPLDS 

« Hide

References

[1]"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides."
Maruyama K., Sugano S.
Gene 138:171-174(1994) [PubMed: 8125298] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library."
Suzuki Y., Yoshitomo K., Maruyama K., Suyama A., Sugano S.
Gene 200:149-156(1997) [PubMed: 9373149] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

AK223409 mRNA. Translation: BAD97129.1.
IPIIPI00017746.
UniGeneHs.591642

3D structure databases

SMRQ53F80. Positions 26-122.
ModBaseSearch...

Genome annotation databases

EnsemblENSG00000138376. Homo sapiens. [Contig view]

Organism-specific databases

HGNCHGNC:952. BARD1.

Phylogenomic databases

HOVERGENQ53F80.

Gene expression databases

ArrayExpressQ53F80.
BgeeQ53F80.

Family and domain databases

InterProIPR002110. ANK.
IPR001357. BRCT.
IPR001841. Znf_RING.
IPR017907. Znf_RING_CS.
[Graphical view]
Gene3DG3DSA:1.25.40.20. ANK. 1 hit.
PfamPF00023. Ank. 3 hits.
PF00533. BRCT. 2 hits.
[Graphical view]
SMARTSM00248. ANK. 3 hits.
SM00292. BRCT. 2 hits.
SM00184. RING. 1 hit.
[Graphical view]
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.
PS50172. BRCT. 2 hits.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ53F80_HUMAN
AccessionPrimary (citable) accession number: Q53F80
Entry history
Integrated into UniProtKB/TrEMBL: May 24, 2005
Last sequence update: May 24, 2005
Last modified: May 5, 2009
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information