Unreviewed, UniProtKB/TrEMBL Q53ER5 (Q53ER5_HUMAN)

Names and origin

Protein names	Submitted name:     SRY-box 7 variant EMBL BAD97294.1
Organism	Homo sapiens (Human) EMBL BAD97294.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	388 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	transcription factor activity Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAD97294.1

Sequences

	Sequence		Length	Mass (Da)
	Q53ER5-1 [UniParc]. Last modified May 24, 2005. Version 1. Checksum: DBA359E1D6DD16DA	FASTA	388	42,196
	10 20 30 40 50 60 MASLLGAYPW PEGLKCPALD AELSDGQSPP AVPRPPGDKG SESRIRRPMN AFMVWAKDER 70 80 90 100 110 120 KRLAVQNPDL HNAELSKMLG KSWKALTLSQ KRPYVDEAER LRLQHMQDYP NYKYRPRRKK 130 140 150 160 170 180 QAKRLCKRVD PGFLLSSLSR DQNALPEKRS GSRGALGEKE DRGEYSPGTA LPSLRGCYHE 190 200 210 220 230 240 GPAGGGGGGT PSSVDTYPYG LPTPPEMSPL DVLEPEQTFF SSPCQEEHGH PRRIPHLPGH 250 260 270 280 290 300 PYSPEYAPSP LHCSHPLGSL ALGQSPGVSM MSPVPGCPPS PAYYSPATYH PLHSNLQAHL 310 320 330 340 350 360 GQLSPPPEHP GFDALDQLSQ VELLGDMDRN EFDQYLNTPG HPDSATGAMA LSGHVPVSQV 370 380 TPTGPTETSL ISVLADATAT YYNSYSVS

References

[1]	"Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides." Maruyama K., Sugano S. Gene 138:171-174(1994) [PubMed: 8125298] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Heart EMBL BAD97294.1.
[2]	"Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library." Suzuki Y., Yoshitomo-Nakagawa K., Maruyama K., Suyama A., Sugano S. Gene 200:149-156(1997) [PubMed: 9373149] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Heart EMBL BAD97294.1.
[3]	Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Heart EMBL BAD97294.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AK223574 mRNA. Translation: BAD97294.1.
IPI	IPI00027779.
UniGene	Hs.709543
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000171056. Homo sapiens. [Contig view]
Organism-specific databases
HGNC	HGNC:18196. SOX7.
Phylogenomic databases
HOVERGEN	Q53ER5.
Gene expression databases
ArrayExpress	Q53ER5.
Bgee	Q53ER5.
Family and domain databases
InterPro	IPR000910. HMG_HMG1/HMG2. [Graphical view]
Gene3D	G3DSA:1.10.30.10. HMG-box. 1 hit.
Pfam	PF00505. HMG_box. 1 hit. [Graphical view]
SMART	SM00398. HMG. 1 hit. [Graphical view]
PROSITE	PS50118. HMG_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q53ER5_HUMAN

Accession

Primary (citable) accession number: Q53ER5

Entry history

Integrated into UniProtKB/TrEMBL:	May 24, 2005
Last sequence update:	May 24, 2005
Last modified:	March 3, 2009
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)